Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02399 ATGAGGAGAAGAACTTCGGATTTGGAAAGGGAGGTGGTTTTGGAGGAGGGTTTGGTGGTGGTGGAGGAGCTGGTGGTGGTTTTGGGGGTGGCTTTGGAGGTGGTGCAGGCGGTGGGGCTGGAGGTGGAGGAGGCTTTGGTGGGGGTGCAGGTGGCGGTGGGGGACATGGACTTGGAGGAGGTGTTGGTGGTGGGTTTGGTTGGTGGAGGACATGGCATTGGTGGTGGAATAGGGAAGGGTGGAGGACTTGGTGGTGGTGGCGGACATGGGTTCGGTGGCGGTGCCGGTGGCGGATTTGGAAAGGGTGGAGGTCTTGGTGGTGGACACGGTGGTGGTGCCGGTGGTGGTGCCGGTGGTGGTTTTGGAAAAGGTGGAGGACTTGGCGGTGGTGTTGGTGGAGGACATGGAATTGGTGGTGGTGCCGGTGGTGGGTTTGGAAAGGGTGGTGGACTTGGAGGTGGAATTGGCAAAGGGGGAGGATTAGGTGGCGGTGCTGGTGGCGGCTTTGGAAAAGGTGGTGGTTTAGGTGGTGGTGTTGGTGGTGGATTTGGAAAGGGTGGTGGCCTTGGAGGAGGAATTGGCAAAGGTGGTGGTTTTGGTGGCGGTGTTGGAGGAGGCTCAGGTGGCGGTGTTGGAGGAGGATTTGGTAAAGGTGGAGGTTTCGGTGGTGGTATTGGAGGGGGATCTGGTGGTGGCTTCGGAGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGATTTGGCGGAGGAGCAGGAGGTGGGTTTGGTGGAGGAGCTGGTTTTCTTCCCTTCAACTCTAGGAAAGGGCCAAGTCATCAAGTTCAATGTTGTGGAAGAATGAGAGTTATTAGGAATTGGATTGTAAGTAAGAAGAGAAAGTTCCTTGGGATTGAGGAGAGATTGGAGAAGATGATCAATTGCATGCGTTCTGGGGAACAGGTTGCTGTTGATGAGATTGGTGGTTATTCATCAGAGTCACTTGCAACAAGGGACTATTCAGCTACAGCGAGTGGCTATTCATCTAGGCCTGGTGCTGCTGAATTTGATCCAAAGTTGGATAATAGCAACATTGAAGAAGCAGAGTCCACACTTCGTGAAAGTGGTTACTTGAACTATGAGGAAGCTAGAGCTTTACTAGGAAGGCTTGAATATCAGAAGGGTAATTTTGAAGCTGCACTTCATGTATTTGAAGGAATAGACATTGCTGCTGTTGCTCCAAAGATGAAAATTTCTATATCTAGAAGATGTGAACGGAATATGAATAGACGCCGTTCGCTCAGTGATGCAGCGCCTCCTATGTCCATTCATGCTGTTAGTCTACTTCTTGAAGCTGTTTTGCTCAAGGCAAAGTCATTGCAGATTCTTGGAAGGTTTCAAGAAGCTGCTAGATCATGCAAGACTATTTTGGACACTGTTGAATCTGCATTACCTGAAGGATGGCCAGAGAACGTTGATTTAGACAGAAAGTTACAAGAGACTATAAGAAATGCTGTAGAACTACTTCCAGAGCTATGGAACCTTGCCGGCTCTCATCAACATGTCATATCATCATTTAGGAGGGCCTTGCTTTATCCATGGAATCTTGACATTGAAACAACTTCAAGAATTCAAAAGGAATTTGCTATGTTTCTTCTGTATAGCGGCTGTGAAGCGAGTCCTCCTTCGCTTCGCTCTCAATTGGACGGTTCCTTTGTCCCACGAAACAATATAGAAGAGGCTGTTCTCTTGCTTCTTATTCTGCTGAGAAATTCTGTTATAGGAAGCATTGAATGGGACCCTTCAGTAGTTGATCATCTTTCTTTTGCTCTAACTGTTTCCGGGGAGTTCAAGACACTGGCTCAACAGGTTGAGGAATTGCTTCCGGAAACCATGGAGAGGAAAGAAAGACATTATATTCTAGCACTTTGTTACTTTGGTGAAGGTGAGCACATGATTGCTTTGGATCTTTTGAGGAACTCTTTGAATGATAGAGAGAACTCGGAGTGCGAACAGGAACTGCTTCTAGCTTCAAAAATTTGTGCAGATAACATGGTTTGTGTTGAGGATGGAATCAAATATTCTTGCAAAGCAATTTCTCATTTGGATGGAAAGTGCATGCAAGTGGTAGCAATTGCATATTGCTTACTAGGTGTTCTGCTCTCATCGAAATCAAGGTTGATAGCTTCTGATTCAGAGAAAGTTTTAATGCAATCCGAAGCACTGAGGGCTCTGAAAACGGCCGAGAGAACGATGAGTGAGAGTGATCCTTACATAGTCCTTCATCTTTGTCTAGAATACGCCGAGCAGCGGAACTTGAGCGTTGCTTTTTGTCATGCAAAGGAACTGGTTAAGCTTGAGGGTGGATCTAGTGTTGCTGCATATGTATTACTTGCAAGGATTTTATCAGCTCAAAAGAATTTTGTGGATGCAGAGTTGGTTATTGATGCTGCCATAGATCAAAGTGGGAAATGGGATCAAGGAGAGTTGTTGAAAACCAAAGCGAAACTCCGGATTGCACAGGGAAGATTAAGGAGTGCAGTGGAGACATATACTTTCCTCCTTGCTGTGCTTCAAGTCCAAAACAAAAGTTTGGGCACTGCAAATAAGGTTATGAAGAGTAAGAGAAACCGCAACAGAAATCTGGAGATGGAAATATGGCATGATTTGGCCAACTTGTACATAGCTTTATCACAATGGCGAGATGCTGAAGTTTGTCTTGCAAAGTCTAAGGCTATTAATCCTTATTCTGCTTCTAGATGGCACTCCACAGGTTTACTTTTCAAGGCCAGAGATCAGCAGCAAGAAGCATTGAATGCATTTAGGAAAGCACTAGACATCGAACCAAACCATGTGCCAAGTTTGATATCAACAGCATGTGTTCTGAGAAAGCTTGGTGGCCAATCATCTTCAATTGTGAGAAGCCTTCTGAGTGATGCACTAAGGCTTGACAGAACAAACCCAAATGCTTGGTACAATCTTGGACTGCTCTACAAACATGATTTGGGCTCATCTGCATTGGAAGCTGCTGAGTGCTTTGAGGCTGCTGCTCATCTTGAAGAAACTTCTCCCATTGAACCCTTTAGATAG 3072 0.4655 MRRRTSDLEREVVLEEGLVVVEELVVVLGVALEVVQAVGLEVEEALVGVQVAVGDMDLEEVLVVGLVGGGHGIGGGIGKGGGLGGGGGHGFGGGAGGGFGKGGGLGGGHGGGAGGGAGGGFGKGGGLGGGVGGGHGIGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGVGGGFGKGGGLGGGIGKGGGFGGGVGGGSGGGVGGGFGKGGGFGGGIGGGSGGGFGGGGGGGGGGGGGGGFGGGAGGGFGGGAGFLPFNSRKGPSHQVQCCGRMRVIRNWIVSKKRKFLGIEERLEKMINCMRSGEQVAVDEIGGYSSESLATRDYSATASGYSSRPGAAEFDPKLDNSNIEEAESTLRESGYLNYEEARALLGRLEYQKGNFEAALHVFEGIDIAAVAPKMKISISRRCERNMNRRRSLSDAAPPMSIHAVSLLLEAVLLKAKSLQILGRFQEAARSCKTILDTVESALPEGWPENVDLDRKLQETIRNAVELLPELWNLAGSHQHVISSFRRALLYPWNLDIETTSRIQKEFAMFLLYSGCEASPPSLRSQLDGSFVPRNNIEEAVLLLLILLRNSVIGSIEWDPSVVDHLSFALTVSGEFKTLAQQVEELLPETMERKERHYILALCYFGEGEHMIALDLLRNSLNDRENSECEQELLLASKICADNMVCVEDGIKYSCKAISHLDGKCMQVVAIAYCLLGVLLSSKSRLIASDSEKVLMQSEALRALKTAERTMSESDPYIVLHLCLEYAEQRNLSVAFCHAKELVKLEGGSSVAAYVLLARILSAQKNFVDAELVIDAAIDQSGKWDQGELLKTKAKLRIAQGRLRSAVETYTFLLAVLQVQNKSLGTANKVMKSKRNRNRNLEMEIWHDLANLYIALSQWRDAEVCLAKSKAINPYSASRWHSTGLLFKARDQQQEALNAFRKALDIEPNHVPSLISTACVLRKLGGQSSSIVRSLLSDALRLDRTNPNAWYNLGLLYKHDLGSSALEAAECFEAAAHLEETSPIEPFR 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02399 1023 PRINTS Eggshell protein signature 92 103 - -
Aip09g02399 1023 PRINTS Eggshell protein signature 208 226 - -
Aip09g02399 1023 PRINTS Eggshell protein signature 151 166 - -
Aip09g02399 1023 PRINTS Eggshell protein signature 176 186 - -
Aip09g02399 1023 PANTHER PROTEIN NPG1 298 1023 IPR043376 -
Aip09g02399 1023 Gene3D Tetratricopeptide repeat domain 347 856 IPR011990 GO:0005515
Aip09g02399 1023 PANTHER OS10G0471400 PROTEIN 298 1023 - -
Aip09g02399 1023 SUPERFAMILY TPR-like 822 993 IPR011990 GO:0005515
Aip09g02399 1023 SUPERFAMILY TPR-like 630 849 IPR011990 GO:0005515
Aip09g02399 1023 ProSiteProfiles TPR repeat profile. 912 945 IPR019734 GO:0005515
Aip09g02399 1023 Gene3D Tetratricopeptide repeat domain 857 1020 IPR011990 GO:0005515
Aip09g02399 1023 SMART tpr_5 878 911 IPR019734 GO:0005515
Aip09g02399 1023 SMART tpr_5 786 819 IPR019734 GO:0005515
Aip09g02399 1023 SMART tpr_5 912 945 IPR019734 GO:0005515
Aip09g02399 1023 SMART tpr_5 444 477 IPR019734 GO:0005515
Aip09g02399 1023 SMART tpr_5 982 1017 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02399 Aip-Chr9 114216972 114224597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02399 307 1023 Calmodulin-binding Proteins AT4G28600 52.473 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02399 K21843 - gmx:100789469 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02399 09 114216972 114224597 Aip09g02399 09 114216972 114224597 ECH