Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02395 ATGACTCTTCTTGTCATCGATTTATCCGGCACATTGCCGAGGAGCGGTACGGGCGCTATAGCCCAAGAaggtcctgttccagcacaacgggatggtcaggcggtgcctgagcctGGCTCTATTATAGATGACTACATCCCTGAGTCTCCTTCAGTAGATTTGGATATGTCAATAGAGTCTCTTTCTACTCACTCCTCTGATCTTTTCACCATAGAGCATATCAAGACTTCATTCGCAATAATTGAAATGGCGAACCACACTGTTATATTGAAAAAGACTACAATTCTACCATTTTTAACTTGCAAGATTTGTGATGAATTGTTGGAGGATGCTACTGCTATTGTTGAATGTCTTCATTTATTTTGCAAGAAGTGCATCCATCACAAAATTATTGAAGAGGAATTAGAACATTGTCCAGTGTGTGATCTAGATTTGGGACCTAAACCTCTCGAGAAATTGAGGCATGACGAAAGTATGCAATCAATAAGAAACACAATATTTCCTCCAAGAAAAGAAAATGTTGTTAATAAGGCGGATGATGATGTTGCCAATGCTGAGAAGAATGAGTTATTAGGTGACCTTGGCATAATTTTGTTTGAAGATCCTGAGAATGAAAAAGATGTGGCATTAAAAGATTTGCTAGATACTTCAAAAGAACATGTAGAAAATATCAAAGAGGTTGAAATCACATGTTTGGGAAACCAAATATCCACTAAAATGGAGTTGAAAAAGTTGGCTAAGTTGTGGTTTAACATGTCATTCAAAGGAAAGTCAAAGACAAAGCCATTACCAAATGATTATATTGCAATCATAGGCTATCGTCGTCGTGTCTCACAATCATGA 843 0.3476 MTLLVIDLSGTLPRSGTGAIAQEGPVPAQRDGQAVPEPGSIIDDYIPESPSVDLDMSIESLSTHSSDLFTIEHIKTSFAIIEMANHTVILKKTTILPFLTCKICDELLEDATAIVECLHLFCKKCIHHKIIEEELEHCPVCDLDLGPKPLEKLRHDESMQSIRNTIFPPRKENVVNKADDDVANAEKNELLGDLGIILFEDPENEKDVALKDLLDTSKEHVENIKEVEITCLGNQISTKMELKKLAKLWFNMSFKGKSKTKPLPNDYIAIIGYRRRVSQS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02395 280 Pfam Zinc finger, C3HC4 type (RING finger) 101 141 - -
Aip09g02395 280 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 215 259 IPR044807 GO:0004842
Aip09g02395 280 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 88 177 IPR044807 GO:0004842
Aip09g02395 280 SUPERFAMILY RING/U-box 95 155 - -
Aip09g02395 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 191 IPR013083 -
Aip09g02395 280 ProSitePatterns Zinc finger RING-type signature. 117 126 IPR017907 -
Aip09g02395 280 ProSiteProfiles Zinc finger RING-type profile. 101 142 IPR001841 -
Aip09g02395 280 SMART ring_2 101 141 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02395 90 172 C3H Transcription Factor Family AT2G30580 54.217 1.18e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02395 K16277 - ahf:114925965 280.411