Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02359 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGATTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGGTATGA 222 0.3964 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYGGCAGPLMDVPCVQDRVFYFPQGHIELV 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02359 73 Pfam UBA/TS-N domain 5 34 IPR015940 -
Aip09g02359 73 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
Aip09g02359 73 CDD UBA_SnRK1_plant 5 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02359 Aip-Chr9 111833746 111834493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02359 48 71 B3 DNA Binding Superfamily AT4G23980 75.000 2.67e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02359 K07198 - ahf:114925841 148.673