Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02350 ATGGAGTTCAACCGTATGTTCGACATTGAAGGTCAAAACTCTGATGCAGGCAGTTCAGATGATTGTTCCGGACATTATCTTGGTACTGACAACGAATACGATGACGTGGAGGGCTTTGAGCCCCGAGGTGGTCCCGAAGCAGGGGAAAAAAGTGTCGGGGATGCTAACAATTGCAGGGGGTCTAGCGGTGCAAATGACGTGGCAGGCGGTGCCCCAAGCTGGCAAGTCTTGGTGGATGACTTCTTGGGTAAAGAGTTTGCAACGGAGGAGGATGCTTATGCTGCGTACAAGGAGTTTGCCAAATTTAGGGGTTTTGGAGTCCGAAAGGGAGATGTAGCTCGGGTTAACGGGGTTTTGGTCAGAAGAGACTTTTTTTGCCATCGACAAGGGACAAGACATCCTAAGCATTATGACCGTCCTGAGCGAGTAAGGGAGGAGAGGCTTGAGAGCCAGATGGATTGTAAGGAAAAGTTGAAGATTTACTATGATATGCAACACAACGTGTGGAAGGTGAGAACCATCATGGACGATCACAACCACGAGCTTGCCCCGGCAATGTTCACATATCTCCTTCCAAGTCACCGAAAGATGAGTGACGGCAACAAGGCATAG 612 0.4935 MEFNRMFDIEGQNSDAGSSDDCSGHYLGTDNEYDDVEGFEPRGGPEAGEKSVGDANNCRGSSGANDVAGGAPSWQVLVDDFLGKEFATEEDAYAAYKEFAKFRGFGVRKGDVARVNGVLVRRDFFCHRQGTRHPKHYDRPERVREERLESQMDCKEKLKIYYDMQHNVWKVRTIMDDHNHELAPAMFTYLLPSHRKMSDGNKA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02350 203 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 182 IPR031052 GO:0006355
Aip09g02350 203 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 75 182 - -
Aip09g02350 203 MobiDBLite consensus disorder prediction 1 66 - -
Aip09g02350 203 MobiDBLite consensus disorder prediction 27 44 - -
Aip09g02350 203 Pfam FAR1 DNA-binding domain 96 184 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02350 Aip-Chr9 111571673 111572284 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g02350 FAR1 1.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02350 - - aip:107615800 362.844