Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02326 ATGACGGGGCAAGCGGTGAAGCTGAATAGAGCCAAGCTTGAGGCATGCTTAACATGTCCTTTGTGCAATAAATTGTTCAACAATGCCACCACCATTTCAGAATGCTTACACACTTTTTGCAGGGGATGCATAGATAAGAAGCTAATAGATGAGCAATTAAAGCACTGTCCAGTATGCAATGCTGACTTGGGTTGTTCTCCACTTGATAAATTAAGGACAGATCATAGTTTACAAGATTTGAGGAACAAAATTTTGCCTGAAGAAGGAAAAAAAATTGGCAAGACACCTAAGAATTGTGTGAAAAGAAAGAAGAAATCTCTGTCTTCTCTAGAAGCCAACGCAACAGGAGCAAAAGCTGCTACTCCTGAGAGAGAAGTTTCCGCGCCTTCGCAACCGGATTGTTCTTCTCCTAAGCCTGAAAAGGTGGAGGAAGATGTCAGAAAAGACGAGAAACAACCGCGGAGGATAGGAATCTTGGATGAAGTCTCTACAAAGTTAACTGCAAGAAGAGCTAAAGTTGTAGCAAGAAAAAAGTACCTTCTGAAAGAGTTAACATCATCTTGTGAACCGGATAAAGTAACCGGAGATCAGAGGAAAGAAAATGATGACCGGTTTCAGCTTGAAATTTCCAATGACAGTTCCAAAGCCAGAGTTCAGAATCCTTCAAAACCAGATTCAAGTCAACAAATAGTGCCAAACAAGATTCCAATTGACAATGTTGAATCATGGCAAGAAGCTCTTGATTTGTGTGAGCCATTAAATTCCATTGTAGAAGCTGCAAGGAAGAACAAATCTTGCAGTAAGTCCACTATGCAAGAACATGCTGTCATTCCATCAGTAAAGTCAAGTGACAATGATGGCCAGCCTAAGGTTGAAAATGGTGATGAGAATGAATCGAATCGTTCGAGATCATCGGATACAAAAGGAAGAAAACTCAAATTCTCTGAGGACTTGAATGTTCCAGTACAGCAGCAAGTGATTACTTCAAATGGTGAAAGCAACAGAGGGTTTGGTCCAGTTTGGTTCTCCTTGGTTGCTTCTGAAGTGAATGAAGAAAGTGCAAAATTGCCAAAAATAACCCCCAGCTACTTAAGGGTCAAGGATGGTAGTTTACTTGTTTCCCATATCAAAATGTATATAGTGAAGAAGCTTGGTCTTGTTAGCGAATCCGAGGTGGAGATCTCGTTGCAAGGTAAACCGGTTCTACCTTGCATGCAACTGCAAAACTTGGTAGAGTTGTGGCTGCAAACAAAGCCATTGAATGAGAAGATTCAAACACATGTTGGAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCATATCATCGAAAGTCTTGA 1338 0.4073 MTGQAVKLNRAKLEACLTCPLCNKLFNNATTISECLHTFCRGCIDKKLIDEQLKHCPVCNADLGCSPLDKLRTDHSLQDLRNKILPEEGKKIGKTPKNCVKRKKKSLSSLEANATGAKAATPEREVSAPSQPDCSSPKPEKVEEDVRKDEKQPRRIGILDEVSTKLTARRAKVVARKKYLLKELTSSCEPDKVTGDQRKENDDRFQLEISNDSSKARVQNPSKPDSSQQIVPNKIPIDNVESWQEALDLCEPLNSIVEAARKNKSCSKSTMQEHAVIPSVKSSDNDGQPKVENGDENESNRSRSSDTKGRKLKFSEDLNVPVQQQVITSNGESNRGFGPVWFSLVASEVNEESAKLPKITPSYLRVKDGSLLVSHIKMYIVKKLGLVSESEVEISLQGKPVLPCMQLQNLVELWLQTKPLNEKIQTHVGSSAKDFVMVLSYHRKS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02326 445 MobiDBLite consensus disorder prediction 211 233 - -
Aip09g02326 445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 110 IPR013083 -
Aip09g02326 445 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 5 444 IPR044807 GO:0004842
Aip09g02326 445 MobiDBLite consensus disorder prediction 90 152 - -
Aip09g02326 445 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Aip09g02326 445 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Aip09g02326 445 MobiDBLite consensus disorder prediction 137 152 - -
Aip09g02326 445 MobiDBLite consensus disorder prediction 265 314 - -
Aip09g02326 445 MobiDBLite consensus disorder prediction 265 287 - -
Aip09g02326 445 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 5 444 - -
Aip09g02326 445 MobiDBLite consensus disorder prediction 209 233 - -
Aip09g02326 445 SUPERFAMILY RING/U-box 13 86 - -
Aip09g02326 445 MobiDBLite consensus disorder prediction 288 314 - -
Aip09g02326 445 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Aip09g02326 445 SMART ring_2 19 59 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02326 Aip-Chr9 108963818 108966732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02326 1 367 C3H Transcription Factor Family AT2G30580 32.051 5.60e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02326 K16277 - pop:7474161 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02326 09 108963818 108966732 Aip09g02326 09 108963818 108966732 ECH