Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02316 ATGGCAACATCAGCATCCGCATATGAGAATGATATCAAGAACCTTAAGGCAACAGAACTCACATTGGGTTTGCCAGGGACTCATCTTCAAGAGAATATACCTATTATTGATCAAGAAAAATCATCAGCATCATCATCATCAAACAAGAGGCCATTGCAATTGCCTCATGAAGAAACTTCTCCTGCTCAGGACTGTGGATCCAAGTGCTCTAATATTGCTAAGAACACTGATGATGATGCTGCACCCCCTCCTTCCAAGGCAAAGATAGTGGGGTGGCCACCAATCAGATCATACAGGAAGAACAGCCTTCAGGAACAATCTGAGGCTGCAGGTGGGATCTATGTGAAGGTGAGCATGGATGGAGCACCTTACCTCAGAAAGATTGATTTGAAGATCTATGGAGGCTATCCACAACTCCTCAAATCCCTTGAAAACATGTTCAAGTTGACTATAGGTGAGTACTCTGAAAAGGAAGGGTATAAGGGATCTGATTATGCACCAACATATGAAGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTTCCTTGGGACATGTTTGTGACTTCGTGTAAGAGGCTAAGAATCATGAAAGGATCTGAAGCCAGAGGTTTGGGTTGTGCTGTATGA 630 0.4365 MATSASAYENDIKNLKATELTLGLPGTHLQENIPIIDQEKSSASSSSNKRPLQLPHEETSPAQDCGSKCSNIAKNTDDDAAPPPSKAKIVGWPPIRSYRKNSLQEQSEAAGGIYVKVSMDGAPYLRKIDLKIYGGYPQLLKSLENMFKLTIGEYSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCAV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02316 209 PANTHER AUXIN-INDUCED PROTEIN 14 206 - -
Aip09g02316 209 Gene3D - 107 209 - -
Aip09g02316 209 SUPERFAMILY CAD & PB1 domains 108 198 - -
Aip09g02316 209 ProSiteProfiles PB1 domain profile. 112 199 IPR000270 GO:0005515
Aip09g02316 209 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 14 206 IPR003311 GO:0005634|GO:0006355
Aip09g02316 209 MobiDBLite consensus disorder prediction 34 54 - -
Aip09g02316 209 Pfam AUX/IAA family 18 206 IPR033389 -
Aip09g02316 209 MobiDBLite consensus disorder prediction 23 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02316 Aip-Chr9 107934005 107935607 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02316 101 205 B3 DNA Binding Superfamily AT2G46530 35.849 7.58e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aip09g02316 AUX_IAA 4.2e-56 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02316 K14484 - gmx:100527777 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02316 09 107934005 107935607 Aip09g02316 09 107934005 107935607 ECH