Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02295 ATGATTACAGGGAAAAATAATGAGCCTGGTAAAACAAGGACTTCTGCTAATGGAATTCATTCAAATAGAATTCTTGGCAGAGGTGCATCCGGAACAGCTTACCATGACTTTATTGAGGACATTCAAGTGGCTGTCAAGATGCTTTCCCTATCTTCAGTGCATGGATATCAACAATTTGTTGCAGAGGTTAAGCTTCTAATAAGAGTATATCATCGAAATCTGACTTCTATTATTGGCTATTGCAATGAAGAAACTAATATAGGACTCATCTATGAATATATGGCAAATGGAAACTTAGGTGAACATCTTTCAGGCTTTGATCCTGCATCCACCAACTTCCCTCCAAACAACAACATCCTACCACCACAGACCTCTATTGAAGTTGTTAACCAGAGAGATACAGATCTTTTCTTCATGTGGCAAAGGTACAAGATTTTGGAACATGAAGCAGAAGAAAAGGCACAAGCCCTGAAGAAGATTAGAGAGACGGTGAATCACAAAAATCATATAGATGGTAGTGTAAAATTGATTGGTACTTCATTATTTGGTGTTCCTAAAGTTAAGCAATAA 570 0.3737 MITGKNNEPGKTRTSANGIHSNRILGRGASGTAYHDFIEDIQVAVKMLSLSSVHGYQQFVAEVKLLIRVYHRNLTSIIGYCNEETNIGLIYEYMANGNLGEHLSGFDPASTNFPPNNNILPPQTSIEVVNQRDTDLFFMWQRYKILEHEAEEKAQALKKIRETVNHKNHIDGSVKLIGTSLFGVPKVKQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02295 189 Gene3D Transferase(Phosphotransferase) domain 1 8 116 - -
Aip09g02295 189 Gene3D - 131 189 IPR046427 -
Aip09g02295 189 PANTHER PUTATIVE-RELATED 22 105 - -
Aip09g02295 189 PANTHER OS07G0107800 PROTEIN-RELATED 22 105 - -
Aip09g02295 189 ProSiteProfiles Protein kinase domain profile. 19 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02295 189 Coils Coil 143 163 - -
Aip09g02295 189 Pfam Protein tyrosine and serine/threonine kinase 20 104 IPR001245 GO:0004672|GO:0006468
Aip09g02295 189 MobiDBLite consensus disorder prediction 1 21 - -
Aip09g02295 189 SUPERFAMILY Protein kinase-like (PK-like) 13 107 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02295 Aip-Chr9 106310290 106313406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02295 23 105 Receptor kinase-like Gene Family AT1G51880 61.446 2.22e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g02295 PK_Tyr_Ser-Thr 2.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02295 - - aip:107619033 379.022