Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02284 ATGACGGAGGGGTCGGAGGAGGCGCGGAGGGAGAATTGGAGCTGTGGTTCAAGACATGTTCTCAGCATTGACATTGATCCAGAATCTCTTGAAATAGCATCTCTTAATGCTGAGGAACTTGAGGTGGATATGGATTTTATTCAGTCTAATGTCATGGACTTGAGGTGGAGAGGCCAAATTGTTCATACAGTTATCATGAATCCTCCTTTTGGAACTCGGAAAAAGGGCGCAGATTTGGACTTTCTCAATGTTGCTTTGAAGGTTGCTTCTCAAGCTGTTTATTCATTGCATAAGAGTTCCACAAGAGAGCATGTAAAACGAACAGCTTTAAGAGATTTCAACGCTAGCAATGTAGAAGTTCTATGTGAGCTTCGATATGATCTGTCGAAACTGTACAAATTTCATAAGAAGAAAGAGGTAGACATTGCTGTTGACCTCTGGCTTCCTCCCAACTCCAACGTGTACTATGAAGTTGAGCTGGTTTCCTTTGTAAAGAAAAAGGAATCGTGGGATCTGAATACACCAGAGAAGATAGAGGCAGCTGGAAAGAAGAAGGAAGAAGGGAATGCATTGTTCAAGGTTGGCAAATATGAAAGAGCATCAAAAAGATATGAAAAGccgcccttcaccccaaagtccctcacccatcgaagaaagaaagaaaagaaggggagaaatcagaagcagggaagaaaggagaggcccgttgccgttgctgtcactgagcttctggctgccaggaacggtgctgttgctgtaggagattgtcgtcagagctgctgctccacttctgtcattcttcctttcataTTAAAAGAAATAGATaaactagaccctaaaggagtgctgaaatggtga 858 0.3019 MTEGSEEARRENWSCGSRHVLSIDIDPESLEIASLNAEELEVDMDFIQSNVMDLRWRGQIVHTVIMNPPFGTRKKGADLDFLNVALKVASQAVYSLHKSSTREHVKRTALRDFNASNVEVLCELRYDLSKLYKFHKKKEVDIAVDLWLPPNSNVYYEVELVSFVKKKESWDLNTPEKIEAAGKKKEEGNALFKVGKYERASKRYEKPPFTPKSLTHRRKKEKKGRNQKQGRKERPVAVAVTELLAARNGAVAVGDCRQSCCSTSVILPFILKEIDKLDPKGVLKW 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02284 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 101 IPR029063 -
Aip09g02284 285 Gene3D Tetratricopeptide repeat domain 167 248 IPR011990 GO:0005515
Aip09g02284 285 PANTHER BNAA03G59050D PROTEIN 19 147 - -
Aip09g02284 285 CDD AdoMet_MTases 14 88 - -
Aip09g02284 285 Pfam Putative RNA methylase family UPF0020 19 75 IPR000241 -
Aip09g02284 285 Gene3D Vaccinia Virus protein VP39 10 149 IPR029063 -
Aip09g02284 285 Coils Coil 30 50 - -
Aip09g02284 285 MobiDBLite consensus disorder prediction 215 229 - -
Aip09g02284 285 MobiDBLite consensus disorder prediction 205 235 - -
Aip09g02284 285 PANTHER UNCHARACTERIZED 19 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02284 Aip-Chr9 105652582 105662617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02284 148 206 Calmodulin-binding Proteins AT5G48570 81.356 8.18e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02284 K24418 - gmx:100305753 233.032