Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02279 ATGATGATAAAGAAGAGAAAGAGTTGCTGCTTGCATTTGAGATTGAGAAGTGGAGCGGAATGCGATTCTTGTGATCAAGAAAATTATGATTCTTTCACTTGCTTATCAATGGCGGTGGATGCATGTCGTGAACAAACCTCTTCATGTTTGGAGAGAATCAAGAAGAGAAAAAGGGAAGAAAACAAGAAACCGTCGTTTTCATGGGGATGTTCAACTGAGCTAATGATGTATGACGATCCATGGAAGCTGAAGAAGGTGCTGAACAGCAGCGACGTGGGGAGCTTGAGTAGGCTGTTGCTTCCGAAGGAGATGGCGGAGCCGCTGGTGGCAGCGGTGTTGGGGTACGACGAGAACCAGAAAGAAGGAATGGAGGTCGAGATATGGGACGTTGACACACAGTCAATGCACAGTCTTGTGTTCAAGAGATGGGGTTCTTCTAGAAGCTATGTCTTCATGGCCAATTGGATTAAAGACTTTGTCAAAAGAAGGTCTCTCAAGTCCGGCCATGAGGTTGCCTTCCACTGGAATCCTTACGCCAACCGCTTTCATTTTTCTGTTCTCAAGGCTGCCACAGAGGAGGATTTCTCAAACTGA 594 0.4613 MMIKKRKSCCLHLRLRSGAECDSCDQENYDSFTCLSMAVDACREQTSSCLERIKKRKREENKKPSFSWGCSTELMMYDDPWKLKKVLNSSDVGSLSRLLLPKEMAEPLVAAVLGYDENQKEGMEVEIWDVDTQSMHSLVFKRWGSSRSYVFMANWIKDFVKRRSLKSGHEVAFHWNPYANRFHFSVLKAATEEDFSN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02279 197 Gene3D - 80 194 IPR015300 -
Aip09g02279 197 CDD B3_DNA 81 188 IPR003340 GO:0003677
Aip09g02279 197 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 35 189 - -
Aip09g02279 197 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 35 189 - -
Aip09g02279 197 SUPERFAMILY DNA-binding pseudobarrel domain 79 188 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02279 Aip-Chr9 105566794 105567387 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02279 36 173 RAV Transcription Factor Family AT3G25730 29.787 5.70e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02279 - - adu:107466113 377.481