Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02274 ATGATGATAAAGAAGAGAAAGAGTTGCTGCTTGCATTTGAGATTGAGAAGTGGAGCGGAATGCGATTCTTGTGATCAAGAAAATTATGATTCTTTCACTTGCTTATCAATGGCGGTGGATGCATGTCGTGAACAAACCTCTTCATGTTTGGAGAGAATCAAGAAGAGAAAAAGGGAAGAAAACAAGAAACCGTCGTTTTCATGGGGATGTTCAACTGAGCTAATGATGTATGACGATCCATGGAAGCTGAAGAAGGTGCTGAACAGCAGCGACGTGGGGAGCTTGAGTAGGCTGTTGCTTCCGAAGGAGATGGCGGAGCCGCTGGTGGCAGCGGTGTTGGGGTACGACGAGAACCAGAAAGAAGGAATGGAGGTCGAGATATGGGACGTTGACACACAGTCAATGCACAGTCTTGTGTTCAAGAGATGGGGTTCTTCTAGAAGCTATGTCTTCATGGCCAATTGGATTAAAGACTTTGTCAAAAGAAGGTCTCTCAAGTCCGGCCATGAGGTTGGTTTCCACTGGGATCCTTATGCCAACCGCTTTGATTTCTCTGTTCTCAAGGCTGCTACAGAGGAGGATTTCTCAAACTGA 594 0.4596 MMIKKRKSCCLHLRLRSGAECDSCDQENYDSFTCLSMAVDACREQTSSCLERIKKRKREENKKPSFSWGCSTELMMYDDPWKLKKVLNSSDVGSLSRLLLPKEMAEPLVAAVLGYDENQKEGMEVEIWDVDTQSMHSLVFKRWGSSRSYVFMANWIKDFVKRRSLKSGHEVGFHWDPYANRFDFSVLKAATEEDFSN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02274 197 SUPERFAMILY DNA-binding pseudobarrel domain 79 184 IPR015300 -
Aip09g02274 197 Gene3D - 80 193 IPR015300 -
Aip09g02274 197 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 35 189 - -
Aip09g02274 197 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 35 189 - -
Aip09g02274 197 CDD B3_DNA 81 188 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02274 Aip-Chr9 105475156 105475749 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02274 79 194 B3 DNA Binding Superfamily AT3G26790 30.833 5.10e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02274 - - adu:107466113 384.415