Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02273 ATGGGTCATTTTGAGGATTATCTGCATTCTGCAGCTTTAAAGATTCAAAAGAGATACCGCGGGTGGAAGGGAAGAAAAGATTTTTCGAGAATATGCAACCGCATTGTAAAAGTTCAGGCTCATGTTAGAGGTCACCAAGTTCGAAAGCAGTACAAAATAGTTGTTTGGTCTGATGGTTTGCTCATTATTTTGGCATACTCGGAACAGACTGGTGATGGTGGTAGCAGTCAACCACAGCCTGTTGAGTAG 249 0.4217 MGHFEDYLHSAALKIQKRYRGWKGRKDFSRICNRIVKVQAHVRGHQVRKQYKIVVWSDGLLIILAYSEQTGDGGSSQPQPVE 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02273 82 Gene3D - 6 54 - -
Aip09g02273 82 SMART iq_5 7 29 IPR000048 GO:0005515
Aip09g02273 82 SMART iq_5 30 52 IPR000048 GO:0005515
Aip09g02273 82 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 55 IPR027417 -
Aip09g02273 82 ProSiteProfiles IQ motif profile. 8 37 IPR000048 GO:0005515
Aip09g02273 82 Pfam IQ calmodulin-binding motif 35 52 IPR000048 GO:0005515
Aip09g02273 82 Pfam IQ calmodulin-binding motif 9 28 IPR000048 GO:0005515
Aip09g02273 82 ProSiteProfiles IQ motif profile. 33 59 IPR000048 GO:0005515
Aip09g02273 82 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 4 66 - -
Aip09g02273 82 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 4 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02273 Aip-Chr9 105473074 105473680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02273 2 69 CAMTA Transcription Factor Family AT5G64220 60.000 2.82e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02273 K21596 - pop:7485869 109.383