Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02246 ATGCCTCCTCCATTTGATTCTATCTCTAAGATCCACCCTCCAAGGGAGGCATGGAGACTCAAAGTTAGGGTACTAAGAACTTGGATTGTTCCTTCTTTTGGAAATCATGATGTTGCAAATTCAATGGAAATTGTTCTTGTTGATGGAGATTCTAACAAAATACAAGCAACTGTTAAGAAGCAGCTCATAAATAGGTTTAAAGAGAGTATTATTGAGGGTCAAACATACCGAATGTCATATTTTAGTGTTGTTCCAAACCAAGGCAATTATAGGGCATCAGAACATGAGTTTAAGTTGGTTTTTCTTAACCGTACAACTGTTATTCCTGTCCCTAACGATGCTATCCCAAAGACATGTTTCAGTTTCTGTTCGTTTGATGAGCTCTTGAAAATGACTGAAGATTACGTTTACTTAGTTGATGTTATTGGTTTGCTAACTTCTGTTGGTGAAGAGAAAGAGTATGTGAAAGATGCGAAAGTGATGAAGATGATCGTTCTTGAGTTATCTTCAAAAGAGTTTGTTTTTTTCTGCCTGATGTTGATTGTGTTTTGCATTTATTAA 561 0.3601 MPPPFDSISKIHPPREAWRLKVRVLRTWIVPSFGNHDVANSMEIVLVDGDSNKIQATVKKQLINRFKESIIEGQTYRMSYFSVVPNQGNYRASEHEFKLVFLNRTTVIPVPNDAIPKTCFSFCSFDELLKMTEDYVYLVDVIGLLTSVGEEKEYVKDAKVMKMIVLELSSKEFVFFCLMLIVFCIY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02246 186 Gene3D - 114 178 IPR012340 -
Aip09g02246 186 CDD RPA1_DBD_A_like 19 107 - -
Aip09g02246 186 PANTHER DNA BINDING PROTEIN-LIKE 41 141 - -
Aip09g02246 186 Pfam Domain of unknown function DUF223 43 132 IPR003871 -
Aip09g02246 186 SUPERFAMILY Nucleic acid-binding proteins 3 113 IPR012340 -
Aip09g02246 186 Gene3D - 4 112 IPR012340 -
Aip09g02246 186 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 41 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02246 Aip-Chr9 103671195 103672004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02246 2 148 Core DNA Replication Machinery Family AT5G45400 24.832 5.22e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02246 - - aip:107616632 377.096