Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02241 ATGAGCTTTTCATCACTGCTACTACCACTTTTCTTCACTCTCATGATTCTTTTCCTCTTGAACCCAACAATGGTATATGGGAATAATGAGGAAGAAGAAGAAGAGCTACTAGCACTGATGGACATGAAGGATAGTATGGATCCATATGGTCACTACCTAACCTCATGGACCATCAATGGCAACCCATGTGATGGTGCTTCCTTTGAAGGTGTGGCCTGCAATGAAAAGGGTCAAGTTGCAAATATTTCTTTGCAGGGAAAAGGTCTCTCAGGGAAGCTTTCCCCAGCCATTGGTGGGCTCAAGCATTTGACAGGACTCTACTTGCATTATAACTCTTTGTATGGTGAGATACCAAGGGAAATTGCAAACTTGACTCAGCTTAGTGATTTGTACCTGAATGTGAATCATCTTTCTGGGAAAATCCCAACGGAGATTGCCAACATGAACAACTTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCATACCTACCCAGCTTGGTTCTTTGAAGAAGCTGAGTGTTGTTGCGCTTCAGTCAAACCAGTTGACTGGTGCTATCCCTGCTAGTTTAGGTGACTTGCCTATACTGATGAGGCTTGATTTGAGTTCTAACAAACTCTTCGGTTCCATTCCCACTAGCCTTGCTGATGCTCCTTCACTCAAAGTTCTTGATCTTCACAACAATACTCTTTCTGGGAATGTGCCTCCTGCTCTGAAGAGACTTGATCATGGATTTCTATATGAAGACAATCTGGGGCTATGTGGACTTGACTTTCCATCCCTTAAGGCTTGCCTTTCTTTAAATCGCAGGCCTGAACCTTATGGAGCAGCAACAAGAGATATCCCAGAAACTGCAAATGTGAAGTTACCTTGCAATGGAAGCCAGTGCCTAAACTCTCCAAAATCAAAACAAGTACCATCCATTACCATTGGCATAGTCGTCATTGTGATTGCAGTGTCAGCAATTGGTCTCTTTGCCTTCACATTATTTCGCAGGCGAAAACAGAAGCTAGGAAACTCTTTTCATGTCTCTGATGGCCGGCCAAGTATCGACGAATCCAGGAGTATATACAGGAAAAGTGGATCTCCTTTGGCGAGCCTCGAGTACTCTACTGGATGGGACCCTTTAGCTGATAGTAGAAGCTTCAATGATGAAGGTGAATTCTTGAAGGGATTGAGCATTTTGACATCTCTGAGGAATGATAATTTGGTGAAGCTGAGAGGGTTTTGTTGTTCAAGTGGAAGAGGTGAATGCTTCTTGGTTTATGACTTTGTTTCCAACGGAAATCTTTCACGGTTTCTTGATGTGAAGGAAGGAGATGGAGAAGTTCTTGAATGGTCAACCAGAGTTTCTATTGTGAAAGGGATTGTTAAAGGTGTAGCATATTTACATGCACACAAGGTAAAGAAACCGGTTCTTGTTCACCAAAACATCTCGGCCGAGAAAGTGCTCGTCGATCACAGGTATAACCCAATGCTGGCAGATTCCGGCCTTCACAAGCTTCTTACCAATGACATTGTCTTCTCTGAACTCAAGGCCAGTGCAGCAAAGGGTTACCTTGCTCCTGAGTATGCCACCACCGGCCGGTTCACCCAGACCAGCGATGTTTATGCTTTTGGGGTGCTCCTATTGCAGATCCTCTCCGGGAAGCAGCAGATCAGTAACTCAATCAGGCTCGCCGCGGAAGCATCAAGATTCCAAGAATTCATTGATCCAAATCTCCATGGGAGATTCTTTGAATACGAAGCGACTAAACTGGCGAAAATCGCTTTGCTTTGCTGCAGTGAGTCTCCTTTTGAGAGGCCATCTATGGAAGCCATTGTTCAAGAACTGGGAAATTGTAGTAGCTGTATCTGA 1866 0.4416 MSFSSLLLPLFFTLMILFLLNPTMVYGNNEEEEEELLALMDMKDSMDPYGHYLTSWTINGNPCDGASFEGVACNEKGQVANISLQGKGLSGKLSPAIGGLKHLTGLYLHYNSLYGEIPREIANLTQLSDLYLNVNHLSGKIPTEIANMNNLQVLQLCYNQLTGSIPTQLGSLKKLSVVALQSNQLTGAIPASLGDLPILMRLDLSSNKLFGSIPTSLADAPSLKVLDLHNNTLSGNVPPALKRLDHGFLYEDNLGLCGLDFPSLKACLSLNRRPEPYGAATRDIPETANVKLPCNGSQCLNSPKSKQVPSITIGIVVIVIAVSAIGLFAFTLFRRRKQKLGNSFHVSDGRPSIDESRSIYRKSGSPLASLEYSTGWDPLADSRSFNDEGEFLKGLSILTSLRNDNLVKLRGFCCSSGRGECFLVYDFVSNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIVKGVAYLHAHKVKKPVLVHQNISAEKVLVDHRYNPMLADSGLHKLLTNDIVFSELKASAAKGYLAPEYATTGRFTQTSDVYAFGVLLLQILSGKQQISNSIRLAAEASRFQEFIDPNLHGRFFEYEATKLAKIALLCCSESPFERPSMEAIVQELGNCSSCI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02241 621 Gene3D Ribonuclease Inhibitor 31 272 IPR032675 -
Aip09g02241 621 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 386 - -
Aip09g02241 621 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 386 619 - -
Aip09g02241 621 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Aip09g02241 621 SUPERFAMILY Protein kinase-like (PK-like) 384 614 IPR011009 -
Aip09g02241 621 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 386 - -
Aip09g02241 621 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 386 619 - -
Aip09g02241 621 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Aip09g02241 621 Gene3D Transferase(Phosphotransferase) domain 1 432 620 - -
Aip09g02241 621 Gene3D Phosphorylase Kinase; domain 1 377 431 - -
Aip09g02241 621 Pfam Protein tyrosine and serine/threonine kinase 387 614 IPR001245 GO:0004672|GO:0006468
Aip09g02241 621 SUPERFAMILY L domain-like 35 243 - -
Aip09g02241 621 ProSiteProfiles Protein kinase domain profile. 319 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02241 Aip-Chr9 103032792 103035502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02241 386 462 Miscellaneous Gene Families AT4G22730 64.103 1.28e-25 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aip09g02241 PK_Tyr_Ser-Thr 1.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02241 - - gmx:100775422 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03697 05 144953754 144957734 Aip09g02241 09 103032792 103035502 PCT