Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02231 ATGGATCTCTGGGCAGAATTTCATGCAGCAAGTTGGGGAAGGGAGTTTGTAGCAGGAGGATTTGGAGGAATTGCTGGGATAGTATCTGGTCATCCATTAGACACAGTGCGAATAAGGCAACAGGTCTTAAACACCGGTGGCCATGGCTCATCATCAGCATTCACCATTCTTAGAAATGCTTTGGCTAAGGAAGGACCTGCTTCTCTCTATCGTGGCATGGGTGCACCTTTGGCCTCTGTTACATTTCAAAATGCTATGGTTTTTCAAACTAATGCAATTCTCTCAAGAGTATTTGGCAAATCTGTTTCTCCTAATGACCCTCCTTCCTTCAAGGGTGTAGCATTAGGAGGAGTTGGCACAGGTGTCCTCCAGAGCCTAATTATTTCCCCGATAGAGTTGGTCAAAATTCGCCTTCAGCTTCATCGCAATGAAAAACACTTGATAGAACAACCACATAAAGGTCCTATAATTGTTGCCAAGAATGTATGGAGAAAAGAGGGACTAAAAGGAATATACAGAGGACTGGGCATCACTGTTATAAGGGATGGACCTTCGCATGGTGTTTATTTTTGGACATATGAATACATGAGGGAACAGCTTCACCCAGGTTGTAGAAAAAGTGGTCAAGAAAGCCTATGTACTATGTTGATGGCAGGTGGATTAGCTGGTGTAGCAAGTTGGATTGTTTGCTACCCTTTTGATGTTGCAAAGACAAAGTTACAAGCTCAAACACCTGATTCTTTGAAATACAATGGCACTGTTGATTGCCTTAGAAAGAGTATTAAGGAAGAAGGGTATGGAATTTTATGGCGCGGATTAGGAACTACAGTTGCTAGAGCTTTTGTAGTACATGGTGTTGTTTTCACAGCTTATGAGATCACATTGAGGTTATTATTTAATCATGAAATTATTCAAATGCAGAAAACTATTTAG 933 0.4126 MDLWAEFHAASWGREFVAGGFGGIAGIVSGHPLDTVRIRQQVLNTGGHGSSSAFTILRNALAKEGPASLYRGMGAPLASVTFQNAMVFQTNAILSRVFGKSVSPNDPPSFKGVALGGVGTGVLQSLIISPIELVKIRLQLHRNEKHLIEQPHKGPIIVAKNVWRKEGLKGIYRGLGITVIRDGPSHGVYFWTYEYMREQLHPGCRKSGQESLCTMLMAGGLAGVASWIVCYPFDVAKTKLQAQTPDSLKYNGTVDCLRKSIKEEGYGILWRGLGTTVARAFVVHGVVFTAYEITLRLLFNHEIIQMQKTI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02231 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 97 IPR018108 -
Aip09g02231 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 199 IPR018108 -
Aip09g02231 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 297 IPR018108 -
Aip09g02231 310 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 300 - -
Aip09g02231 310 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 300 - -
Aip09g02231 310 Gene3D Mitochondrial carrier domain 6 304 IPR023395 -
Aip09g02231 310 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Aip09g02231 310 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Aip09g02231 310 PRINTS Mitochondrial carrier protein signature 123 141 IPR002067 GO:0055085
Aip09g02231 310 PRINTS Mitochondrial carrier protein signature 172 190 IPR002067 GO:0055085
Aip09g02231 310 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085
Aip09g02231 310 SUPERFAMILY Mitochondrial carrier 11 292 IPR023395 -
Aip09g02231 310 Pfam Mitochondrial carrier protein 211 301 IPR018108 -
Aip09g02231 310 Pfam Mitochondrial carrier protein 114 200 IPR018108 -
Aip09g02231 310 Pfam Mitochondrial carrier protein 11 100 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02231 Aip-Chr9 102377406 102378888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02231 1 302 Antiporters AT1G79900 64.901 8.08e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02231 K15109 - gmx:100812056 451.44