Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02229 ATGGATGAGTCAAATAAGCATAAGGCCATCAGAGCCAAAGAGATTTCTGAGAAAATGTTTGCTGCAGGTGATGTTTATACTGCAATGAGGTTCGCTTGTATGGCTCGAAATTTGTTTCCTGGTCTTGAGGGTGCGCAAGACGATGTTGCCATAATGAGGGAATCGTACATGAGTTTAGCTTCCCTGATTCACTCTGAGGAGAACAAGTTTGTTGGCGCAGATGGGGCCTTTGAACTTGTTTCGCAAGCATGGAGTGTGCTGTCGGATAAGGCTAAGAGGGCAATGTTCGATGAGAAGATTAATGCCCCAGCATTCGATGAGGAGGTGAAGGTGGAAACATGTAAACTTGCAACTGAGTGTGAATATATACCATCACAAGAGGGGGATAATTGTGATCACAATGTTACTGAGGCTGCCTCTTCAAATGCAAAGATTCAGAAGGACAATTCACCTGCATCAAGATCAAGTACATTTTGGACTATGTGCCGTAGGTGCAAGCTTGTATTCCTGTACCCTAGAGTTAAAGTTAACTGTAGACTTTTGTGTTTTGTTTGCAACAAAGAATTTATGGCAGTTGAACTAGATAGACGGAGGGTTTTATCAGCAAGGAGGCGCTCCAGGGGTTTGCACACTGTCAATCCACAGGCACATGATGTAAGCAACTTTCATGGCAGTACATTACTGAGAAAAACTTGTCAGGGTTCCTCTGCAACTCAAGAAAAAGATGTTCAACAGATGTATCAGAAAGTAAAGCGAAAGCGCAATGAGGAGCAAGTAACAGAGAGGGAAAATGCCTCCCAAGAGGAGCACCCTGTTGCTAAAAGAAGTTACTTTAATCCTTCCAAGATAAGAAGTGCCTTGGAGGATATGAGCTTGACCGGCTCTGATGAGCGAAACACAAAGGAGCCAGATTTCAAATATAGCGGGACAAGCCAACCTAAAGAGAGCGGCATTGCAAAAGGCATCTACCAGGTGGAGCTTCGTAACCATTTTATGGACGTTGCTGTAAATGCGCTTAGTACAAAACTAGCTGCTCTTAATCCGGATACTAATGATAGCCAGAAAGCAAATGAGACGGGGGAAACATTTTTGAGAGAATCTGAAAGTTATGATCAAGACAATTGTGAGAAGCCAGAAGAAAGGACAAGCGGAGTCCAAGCAACCATGCCATCTGCAGGCTCTAATACTATGACTGACATGCTAACAAAATCTTTGGGGAAGATGTCAATAGAGTTTCCAACTTCCAAATAA 1251 0.4317 MDESNKHKAIRAKEISEKMFAAGDVYTAMRFACMARNLFPGLEGAQDDVAIMRESYMSLASLIHSEENKFVGADGAFELVSQAWSVLSDKAKRAMFDEKINAPAFDEEVKVETCKLATECEYIPSQEGDNCDHNVTEAASSNAKIQKDNSPASRSSTFWTMCRRCKLVFLYPRVKVNCRLLCFVCNKEFMAVELDRRRVLSARRRSRGLHTVNPQAHDVSNFHGSTLLRKTCQGSSATQEKDVQQMYQKVKRKRNEEQVTERENASQEEHPVAKRSYFNPSKIRSALEDMSLTGSDERNTKEPDFKYSGTSQPKESGIAKGIYQVELRNHFMDVAVNALSTKLAALNPDTNDSQKANETGETFLRESESYDQDNCEKPEERTSGVQATMPSAGSNTMTDMLTKSLGKMSIEFPTSK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02229 416 MobiDBLite consensus disorder prediction 252 270 - -
Aip09g02229 416 MobiDBLite consensus disorder prediction 384 416 - -
Aip09g02229 416 PANTHER BNAC03G44070D PROTEIN 47 375 - -
Aip09g02229 416 PANTHER BNAC03G44070D PROTEIN 3 45 - -
Aip09g02229 416 SUPERFAMILY Chaperone J-domain 48 99 IPR036869 -
Aip09g02229 416 MobiDBLite consensus disorder prediction 289 315 - -
Aip09g02229 416 MobiDBLite consensus disorder prediction 359 380 - -
Aip09g02229 416 MobiDBLite consensus disorder prediction 347 416 - -
Aip09g02229 416 Coils Coil 243 263 - -
Aip09g02229 416 MobiDBLite consensus disorder prediction 252 273 - -
Aip09g02229 416 ProSitePatterns Nt-dnaJ domain signature. 77 96 IPR018253 -
Aip09g02229 416 Gene3D DnaJ domain 41 102 IPR036869 -
Aip09g02229 416 PANTHER HEAT SHOCK PROTEIN-LIKE 3 45 - -
Aip09g02229 416 PANTHER HEAT SHOCK PROTEIN-LIKE 47 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02229 Aip-Chr9 102300004 102301780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02229 24 199 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 25.568 2.82e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02229 - - ahf:112711122 772.696