Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02224 ATGTGTTTGGATTTTGGAGATGTTGAGGGTTTGGCTGTTGAAGATATTATGCAAAAGACCTTTAGAACTGATGATGATTCGTATGAGTTCTACAAAAATTTTGGTCAATATCATGGGTTCAGTGTCCGAAAAGGGGACTCACGAAGGGATGATGATGGAAATGTTAGGAGGATGAGTTTTTTTTGTAATAAGGAGGGATTGAGAGATCCTAAGCACTATAATAGACTGGATAGGAGGCGAGTACATAACCCTGAGACGAGAACAAATTGCAACGCGAAGTTTTCTGTTCACCTAGATAAGAGTGCTTCCGTATGGCAAGTGAGGAAGATCAACAATAACCACAACCATGAATTGACTCCCCAGGTAATGGTACACCTAATCCCAAAGTATAGGTCATTGACTGAAAGGGCGAAAGCGCAAATTGATGGATTCCGTGAGTGCGGGATATCGACGGCAAAAACAATGCGATATATGGCAGGATTGTCGGGTGGGTATTCGTTGGTAGGATTTGTAAAGAAGGACGCATACAATTATATTGACAAGCAAAGGCGTAAGCAAATTGTTGACGGAGATGCTGAATCTGCGATAGCCTACCTAGAAGGAAAGGCAGAGGCTGATCCTATGCTGATGGCATGGTACAATTTGATCGAGGATAGAATGCTTGCAAATATGttttgggccgacgggggaagtaggttggactaccaatattttggagatgttctggctttcgactcgacttacaaaaaaaataagtaCAACAGACCACTGGTTATTTTCTCAGGATCAAACAATCACAAGCAGACCACGATCTTCGGCTTTGGGCTAGTGTTGGATGAGATGATAGGGTTATATACTTGGCTATTGAAGAGCCTATTGGAGGTAATGTGCCAAAAGATGCCATCTGTGGTTGTAACCGACGGTGATGAAGCAATGCGGGAAGCTGTGAGAGTGGTATTCCCTAGAGCAACCCATCGGTTGTGTAGGTGGCACTTTGAGAAGAATGTCATGTCAAATGTAAAAGATGCAGGATTGCGCGCGCAATTTAGTCGGTGGCTTTATGCAGACATTGCAGTTAACAAATTCTTGACGGAATGGAGCCAGGCTGTTGAGGAGTTTAGTTTGCAAGATAGCCTCTGGATAAATCAGGTATTCGGGAAGAAGGATATGTGGGCGAATGCGTACCTAAGGGATAAATTTTGTGCTTGTATAAGAACGACGTCAAGGTGTGAAGGTATAAATAGCGTTGCAAAGAACTTCCTTCAGTCGAAGCATGGGATGCTTGAACTTGTTCAAAATTTGGAACTGATGGTCCGTGACTATCGAAACAACGAGTTGTTGGTGCAATTTAGATCAATTGACAGCGTTCCGGTGATAACGACAAGCTTGGAATCACTAGAGCGTTGCGCTGCGAGTCATTATACACGTGCAATATTCGGGGATGTTTGA 1449 0.4072 MCLDFGDVEGLAVEDIMQKTFRTDDDSYEFYKNFGQYHGFSVRKGDSRRDDDGNVRRMSFFCNKEGLRDPKHYNRLDRRRVHNPETRTNCNAKFSVHLDKSASVWQVRKINNNHNHELTPQVMVHLIPKYRSLTERAKAQIDGFRECGISTAKTMRYMAGLSGGYSLVGFVKKDAYNYIDKQRRKQIVDGDAESAIAYLEGKAEADPMLMAWYNLIEDRMLANMFWADGGSRLDYQYFGDVLAFDSTYKKNKYNRPLVIFSGSNNHKQTTIFGFGLVLDEMIGLYTWLLKSLLEVMCQKMPSVVVTDGDEAMREAVRVVFPRATHRLCRWHFEKNVMSNVKDAGLRAQFSRWLYADIAVNKFLTEWSQAVEEFSLQDSLWINQVFGKKDMWANAYLRDKFCACIRTTSRCEGINSVAKNFLQSKHGMLELVQNLELMVRDYRNNELLVQFRSIDSVPVITTSLESLERCAASHYTRAIFGDV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02224 482 Pfam FAR1 DNA-binding domain 29 119 IPR004330 -
Aip09g02224 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 14 480 IPR031052 GO:0006355
Aip09g02224 482 Pfam MULE transposase domain 241 335 IPR018289 -
Aip09g02224 482 PANTHER OS02G0262500 PROTEIN 14 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02224 Aip-Chr9 101684521 101685969 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g02224 MULE 6.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02224 - - aip:107615767 989.949