Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02221 ATGTTACAGAATTCTGAACAAACATCTTTTGGGTTAGTATTTAGCAAATTGGCAGAGGAGATTGGTGAACCTGTCGACTTTGAACTTCCAGAATGGTTTAATAAGTGCAAGCCAATGCCAGTAACATTTATAAAACGCAATATATATCTGACAAAAAGGGTTAAAAGAAGGCTTGATGACGATGGCATATTTTGTTCTTGTACATCATCACCTGGATCTTCTGCTGTATGCGGTAAAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGCTCTTCAGGCTGTAAATGTGGGGTTTCCTGTCTTAACAAACCATTCCAGCATCGACCCATCAAAAAGATGAAATTAGTTCAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCAAGGAGAATTTGTGATAGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGATTATGGAACATGAAACTTCGTGGGGTGACAAACTTCTACCTATGTGAAATAAATCGAGATATGGTGATCGATGCAACATATAAAGGAAACAAATCAAGATATATCAATCATAGTTGCTGTCCTAATACTGAGATGCAGAAATGGATAATTGACGGTGAAACGAGAATTGGCATATTCGCAACGCGCGACATAAGGAAAGGCGAACATCTGACATATGATTATCAGTTTGTCCAGTTTGGTGCGGATCAGGATTGCCACTGCGGGGCTAATATGTGCAGGCGTAAGCTTGGTGTGAAACCTACCAAGCCTAAAACTTCTTCAGATGCTGCATTAAATTTATTCGGAGACCAGGTTTATCAGAATGGAGGTTTGCATATTGGAAATTCCCGCCTCTTTTGCCAATCAAACTGCCTTCGCAATTGCATTGGTGAAGTTGTTAGAATCAGACACCTTGATATTATAAGGTTCGGGATTATTAAGCGGTTTCATGAATATTCGAAGAAACACTCGATCATGTTTGAGGATGGACATGTTGAATTTTTTGACATGTCCAAGGAAGATTGGGAACTGGTTACATTGTGA 1041 0.3948 MLQNSEQTSFGLVFSKLAEEIGEPVDFELPEWFNKCKPMPVTFIKRNIYLTKRVKRRLDDDGIFCSCTSSPGSSAVCGKDCHCGMLLSSCSSGCKCGVSCLNKPFQHRPIKKMKLVQTEKCGSGIVADEDIKQGEFVIEYVGEVIDDKTCEERLWNMKLRGVTNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIRKGEHLTYDYQFVQFGADQDCHCGANMCRRKLGVKPTKPKTSSDAALNLFGDQVYQNGGLHIGNSRLFCQSNCLRNCIGEVVRIRHLDIIRFGIIKRFHEYSKKHSIMFEDGHVEFFDMSKEDWELVTL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02221 346 SUPERFAMILY SET domain 24 240 IPR046341 -
Aip09g02221 346 Gene3D SET domain 30 265 IPR046341 -
Aip09g02221 346 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 9 343 - -
Aip09g02221 346 ProSiteProfiles SET domain profile. 111 228 IPR001214 GO:0005515
Aip09g02221 346 ProSiteProfiles AWS domain profile. 60 109 IPR006560 GO:0005634|GO:0018024
Aip09g02221 346 ProSiteProfiles Post-SET domain profile. 234 250 IPR003616 -
Aip09g02221 346 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 34 305 IPR025787 -
Aip09g02221 346 SMART set_7 111 234 IPR001214 GO:0005515
Aip09g02221 346 Pfam SET domain 122 227 IPR001214 GO:0005515
Aip09g02221 346 CDD SET_ASHR3-like 112 250 - -
Aip09g02221 346 PANTHER SET DOMAIN PROTEINS 9 343 - -
Aip09g02221 346 SMART shorttest3 60 110 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02221 Aip-Chr9 101417574 101421780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02221 84 246 C2H2 Transcription Factor Family AT2G23740 34.426 1.26e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip09g02221 SET 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02221 - - gmx:100808183 597.045