Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02210 ATGCCGAAGGAGGCATGCCTCACTGTAAGGACTAGCGGTGCGCGCCAGATAATCGAAGATGCCGGTTTGGGCGGCTATTTGGGACTTGCAGTTGCCATCATGTATGAGAGGAGTTTGGGTGAAGAATCTCCTTGGGCAGGGTACCTTCAGGTCTTGCCCAAACAAGAGTGTGTGCCATTGGTTTGGACCCTCAATGAAGTCGATGAGCTTCTGCATGGAACCGAGCTTCATCAGACGGTACAAGAAGACAAAGCTCTTATCTGTGACGACTGGAAAGAAAATATTTTTCCCCTATTGGATTCAGTGCCTTCAAGGCTTAACCCAACATTTTTTGGTATAGAACAATATTTTGCTGCAAAAAGTCTTATTTCTTCACGGGGTTTCGAGATAGATGATTTCCATGGTTTTGGTATGGTTCCCCTGGCAGACCTATTCAATCATAAAACAGGGGCCGAGGATGTGCATTTCACCGCCTCATCTAATTCTGTAGCTGATGATGATGTCGATGATGATAATAGTAACAATGATGAGGGCATTGCTGATGAAGAAGCATTGGCTGAGAAATCTTCCACAGATACAACTGATCTGGATGCTACTCATGTTGAGAATGGCAATGCTAGTGACACAGACTGTTTGTCGGATACAGGAGATGACGATCCTTCAATGCTGGAAATGATTGTGGTAAAAGATGTCAGCAGTGGAGCAGAGGTGTTTAATACTTATGGGTTGATGGGTAATGCTGCATTGCTTCATAGATATGGATTTACTGAGCAAGATAATCCGTATGACATTGTTAACATTGATTTGGAAATGGTGATTCAATGGTGCTCTTGTTTGTTTTCTGATCGGCACAGTAGGTCAAGGGTCTCCCTATGGAGAAGGTTAGGCTATTCTGCATGCGGTGACCAAAACTCGGAATATTTCGAGATTTCATTTGAAGGAGAACCACAGACTGAACTCATGGTTTTGTTGTATGTCATGCTGTTGCCAGATAATGCATACCATATGTTGGACCTTTCGCTATCGGTTGCCAGATCTGGGCATGAATCAAGCGATGCTAATCTGTTGGATGATAACATATTTGCAATCAAATCATGTAATGTGAGCAAGAGATCTCTGCTGACAAAAAAAGTACGTGATGGTTTGTTAGCACTTGCAGACATGAGGGAGGGTCTCTATGGTTTGGAACCAATAGAAGACGATATTGCGCGACTGGGAAAGTGTAGTTCGGTTAGAGAGAGGAAGTTGTATCATTCTTTGATGCTGCGCATGTGCGAAAGGAGGATCCTTCAGAGACTCAGACATTATGCTTCTGAGCCATTTGAAATCAATAATCATAGTTCTTCAAGGAAGAAGTTGAAGTCAACAAAGAGAAAAAGATAA 1383 0.4295 MPKEACLTVRTSGARQIIEDAGLGGYLGLAVAIMYERSLGEESPWAGYLQVLPKQECVPLVWTLNEVDELLHGTELHQTVQEDKALICDDWKENIFPLLDSVPSRLNPTFFGIEQYFAAKSLISSRGFEIDDFHGFGMVPLADLFNHKTGAEDVHFTASSNSVADDDVDDDNSNNDEGIADEEALAEKSSTDTTDLDATHVENGNASDTDCLSDTGDDDPSMLEMIVVKDVSSGAEVFNTYGLMGNAALLHRYGFTEQDNPYDIVNIDLEMVIQWCSCLFSDRHSRSRVSLWRRLGYSACGDQNSEYFEISFEGEPQTELMVLLYVMLLPDNAYHMLDLSLSVARSGHESSDANLLDDNIFAIKSCNVSKRSLLTKKVRDGLLALADMREGLYGLEPIEDDIARLGKCSSVRERKLYHSLMLRMCERRILQRLRHYASEPFEINNHSSSRKKLKSTKRKR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02210 460 CDD SET_LSMT 2 256 - -
Aip09g02210 460 MobiDBLite consensus disorder prediction 164 180 - -
Aip09g02210 460 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 2 438 - -
Aip09g02210 460 SUPERFAMILY SET domain 219 260 IPR046341 -
Aip09g02210 460 Gene3D set domain protein methyltransferase, domain 1 1 255 - -
Aip09g02210 460 MobiDBLite consensus disorder prediction 196 211 - -
Aip09g02210 460 PIRSF RMS1_SET 1 440 IPR011383 GO:0016279|GO:0018026
Aip09g02210 460 SUPERFAMILY SET domain 2 161 IPR046341 -
Aip09g02210 460 MobiDBLite consensus disorder prediction 181 195 - -
Aip09g02210 460 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 2 438 - -
Aip09g02210 460 MobiDBLite consensus disorder prediction 160 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02210 Aip-Chr9 99960114 99962929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02210 1 454 NAC Transcription Factor Family AT3G56570 52.697 1.80e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02210 K05302 - gmx:100794971 615.92