Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02161 ATGGTCTTCGTCTGCTTCGTCGTTGAGCGCTCCATCTACCGCTTTGGAAAGTGGTTGAAGAAGACAAGAAGGAAGGCTCTCTTTGCATCACTGGAAAAGATTAAGGAAGCTTTGCGAATTGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATCGGAGCAGTTACTCGACCTCCGAATCTTTCTATTGTTTCTGAATTTCTTCCCAGAGGAAGCTTGTACAGACTAATTCATCGACCAAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTTGATACTGTAAGATTCTGTTTTCTTTTCTTGCAATGTAGTTTCATTAAGTAA 345 0.4116 MVFVCFVVERSIYRFGKWLKKTRRKALFASLEKIKEALRIVQIMKRLRHPNVVLFIGAVTRPPNLSIVSEFLPRGSLYRLIHRPNNQLDERRRLRMALDTVRFCFLFLQCSFIK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02161 114 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 32 111 - -
Aip09g02161 114 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 32 111 - -
Aip09g02161 114 Pfam Protein tyrosine and serine/threonine kinase 32 100 IPR001245 GO:0004672|GO:0006468
Aip09g02161 114 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02161 114 Pfam Mlo family 1 42 IPR004326 GO:0006952|GO:0016021
Aip09g02161 114 SUPERFAMILY Protein kinase-like (PK-like) 19 101 IPR011009 -
Aip09g02161 114 Gene3D Transferase(Phosphotransferase) domain 1 12 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02161 Aip-Chr9 95650840 95653539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02161 32 102 MAP Kinase Kinase Kinase AT1G73660 80.282 4.28e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip09g02161 PK_Tyr_Ser-Thr 3.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02161 - - gmx:100778331 123.25