Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02158 ATGGAGATAGAATCAAGTGACAAGGGTTCTTTGGGGCCAGGGTTGAGCCCTCTGAGTGAGACTCTTTGGAGAGAAAAGACAAACACAGAGCTCATTGGAGACGTCTCGGCCAGGCTGACATGGAAGGACTTAACTGTGACTGTCACACTCAGCACGGCGGGTGAGACGCAGAATGTTCTAGAAGGTCTAACTGGCTACGCTGAGCCGGGGACCTTCACTGCTCTCATGGGGCCGTCTGGTTCCGGAAAATCTACCCTTCTTGATGCCTTGTCCGGTCGCCTCGCCGCCAATGCCTTCCTCTCTGGGACCGTTCTTCTCAATGGTCGCAAAGCCAATCTCTCTTTTGGCACTGCTGCTTATGTGACACAAGATGACAACTTGATTGGGACACTAACAGTGAGAGAGACGATTTCATACTCTGCTCAGTTGCGGCTACCGGACAAGATGTCGCCGTCGGATAAGGAAGCACTTGTTGAGAGCACCATAGTGGCAATGGGGCTTCAGGATTGTGCAGACACTGTGATTGGGAACTGGCACTTGCGAGGGATAAGCGGTGGAGAAAAGAGAAGGGTTAGCATTGCCTTGGAGATCTTGATGAGGCCTAGATTGCTCTTCCTTGATGAACCTACAAGTGGACTTGACAGTGCATCAGCTTTCTTTGTGACTCAAACATTACGTGCCTTGGCAAGGGATGGAAGAACCGTGATAGCTTCTATTCATCAACCTAGCAGTGAAGTTTTCGAACTATTTGATCAATTGTACTTGCTTTCTGGGGGTAAAACTGTCTATTTTGGCCACGCTTCTGCAGCATATGAGGCAATAAACTTAAACTCTGCCGCTTTCTTTGCACAAGCTGGATTTCCATGCCCTGCTTTGAGGAACCCATCAGATCACTTTCTTAGGTGCATCAATTCTGACTTTGACAAAACGTGTTATTTGTACATACTTTTATTTTATGCATTAACAAATGTGATCAATCAGTTTGAGGCAAGTGATGATCCCCTTGATAAGATAACTACTGCTGAAGCTATCAGAACTCTCAATGAGTACTACCGAACTTCTCAGCATTCTTATGCTGCAATACAGAAAGTGGACGACATATCCAAAATTAAGGGAACCGTGCTCGATGCCGGAGGAAGTCAGGCTAGTTTCTTCAGGCAGTCATACACTTTAACCAAGCGCTCGTTGATTAACATGTCAAGAGATTTTGGTTACTACTGGCTTAGGCTTGTAATCTACATTGTGGTCACTATCTGCATTGGAACCATTTATTTGAACATCGGCACAAGCTATGACTCAATTCTGGCAAGGGGCTCATGTGCATCTTTTGTGTTTGGTTTTGTAACCTTCATGTCAATTGGTGGATTCCCGTCGTTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGCTTAATGGCCACTATGGCGTGACAGCATTTGTGATCAGCAACACGTTATCCGCTATGCCATTCCTGATGCTAATCACCTTTCTCTCGGCTACCATTTGTTACTTCATGGTTCGCCTGCATCCCGGCTTTTCACATTATGTGTTCTTTGTCTTGTGCCTTTTTGCTAGCGTTATGGTGGTAGAAAGCTTAATGATGGCCATTGCTAGTGTTGTCCCCAACTTCCTCATGGGTATCATAACTGGAGCAGGGATTCAGGGTATATTCATGTTAGTCTCTGGCTTCTTTCGGCTCCCACATGATATCCCAAAGCCATTTTGGCGCTATCCAATGTCATATATAAGTTTCCATTTTTGGTCACTACAGGGACAATACCAAAATGATCTGAGGGGCTTGCTATTCGACAACCAATCGCCGGACCTTCCCAAAATACCGGGCGAATACATCCTGGAGAACGTTTTCCAAATCAATGTGAACCGGTCGAAGTGGATCGACCTAGGGGTGATCTTCAGCATGATTCTCGTGTACCGCATCATCTTCTTTGTGATGATTAAGGTCAATGAGGATGTCACTCCTTGGGTCAGAGGTTACGTAGCAAGAAGGAGAATGCAGAACAAGAATATTGCTCCTGATGCTCTCACTCAATCTCCATCACTGAGAGCATATGTTAATAGGGACACTCGTAGAAGGTAG 2100 0.4581 MEIESSDKGSLGPGLSPLSETLWREKTNTELIGDVSARLTWKDLTVTVTLSTAGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSGRLAANAFLSGTVLLNGRKANLSFGTAAYVTQDDNLIGTLTVRETISYSAQLRLPDKMSPSDKEALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGHASAAYEAINLNSAAFFAQAGFPCPALRNPSDHFLRCINSDFDKTCYLYILLFYALTNVINQFEASDDPLDKITTAEAIRTLNEYYRTSQHSYAAIQKVDDISKIKGTVLDAGGSQASFFRQSYTLTKRSLINMSRDFGYYWLRLVIYIVVTICIGTIYLNIGTSYDSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLMLITFLSATICYFMVRLHPGFSHYVFFVLCLFASVMVVESLMMAIASVVPNFLMGIITGAGIQGIFMLVSGFFRLPHDIPKPFWRYPMSYISFHFWSLQGQYQNDLRGLLFDNQSPDLPKIPGEYILENVFQINVNRSKWIDLGVIFSMILVYRIIFFVMIKVNEDVTPWVRGYVARRRMQNKNIAPDALTQSPSLRAYVNRDTRRR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02158 699 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 10 692 - -
Aip09g02158 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 273 IPR027417 -
Aip09g02158 699 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Aip09g02158 699 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 283 IPR003439 GO:0005524
Aip09g02158 699 PANTHER OS04G0528300 PROTEIN 10 692 - -
Aip09g02158 699 Pfam ABC transporter 62 211 IPR003439 GO:0005524
Aip09g02158 699 SMART AAA_5 69 240 IPR003593 -
Aip09g02158 699 Pfam ABC-2 type transporter 387 593 IPR013525 GO:0016020|GO:0140359
Aip09g02158 699 Gene3D - 33 284 IPR027417 -
Aip09g02158 699 CDD ABCG_EPDR 36 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02158 Aip-Chr9 95204338 95209034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02158 70 244 Calmodulin-binding Proteins AT2G36910 34.409 2.23e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02158 K05681 - gmx:100816389 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02158 09 95204338 95209034 Aip09g02158 09 95204338 95209034 ECH