LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip09g02157	ATGAACGGCGATGTCGTTCTTCCTGATTCCTGGTCTCTCATCCCTCGCGCTGTTGACTTCGGTGGCGCCATTTTGCTATGTGTAGCTTTGGCCTACTTCATCTCCGACCGCCGTTGGACGAAGAAGAAACTGATTATGAAGAAAAGCAGAGGAGTGCTTGCTCTTCAAATTATCCAAAAGAAACTTCAAGTTTGGTGTAGGCAACAAAAGGGGAACTGGGAACTAGGAAAGATACAGTCAACTTCAGAAGAGGAAGCATGCGTTTCGCTTTCAATTGGAAATGTTATGAAAGTGTCCAGATTAGCACTCCTACTGGCTAATCCCGACATTTTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAACCCTCAGTTCTTTACAATCTTAAGAGTCATTACACTCAAGATTTGATTTACGCAGGGCCAGTTTTAATTGCACTCAATCCCTTCAAAGATGTCCAGATTTATGGAAGTGAATACGTAGAAGCTTATAAACAGAGATGTAATGATAATCCTCATGTTTATGCTATGGTAGATACAGCTTATAACGAGATGATAAGAGATGAAGTAAATCAATCCATTATCATAAGTGGTGAGATGCATCAGAAGAAACAGGAGCAGATGCATCAGAAGGAGCAGGAGCAGCAGCAGCAGGAGTATTAG	672	0.4152	MNGDVVLPDSWSLIPRAVDFGGAILLCVALAYFISDRRWTKKKLIMKKSRGVLALQIIQKKLQVWCRQQKGNWELGKIQSTSEEEACVSLSIGNVMKVSRLALLLANPDILEGVDDLIQLSYLNEPSVLYNLKSHYTQDLIYAGPVLIALNPFKDVQIYGSEYVEAYKQRCNDNPHVYAMVDTAYNEMIRDEVNQSIIISGEMHQKKQEQMHQKEQEQQQQEY	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip09g02157	223	PANTHER	MYOSIN-2 ISOFORM X1	50	209	-	-
	Aip09g02157	223	Gene3D	Kinesin motor domain	63	217	IPR036961	-
	Aip09g02157	223	PANTHER	MYOSIN	50	209	-	-
	Aip09g02157	223	Pfam	Myosin head (motor domain)	114	205	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Aip09g02157	223	MobiDBLite	consensus disorder prediction	204	223	-	-
	Aip09g02157	223	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	77	202	IPR027417	-
	Aip09g02157	223	Coils	Coil	204	223	-	-
	Aip09g02157	223	MobiDBLite	consensus disorder prediction	205	223	-	-
	Aip09g02157	223	ProSiteProfiles	Myosin motor domain profile.	112	223	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Aip09g02157	223	PRINTS	Myosin heavy chain signature	194	219	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Aip09g02157	223	PRINTS	Myosin heavy chain signature	140	159	IPR001609	GO:0003774\|GO:0005524\|GO:0016459

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip09g02157	Aip-Chr9	94945409	94948116	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip09g02157	57	209	Myosins gene family	AT5G54280	63.226	1.22e-60	203

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip09g02157	K10357		-	gmx:100819335	226.868