Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02139 ATGGATTCTAAAAACTATGATTTGGATGAGTTTTTTCCTTCCATTTCCTTTGATTGTTTATATGATCCGAACCCCAACAACCCTTCAGTTTTCATATATGAATTGGATTCTCTACATGAATCTCAATTGTTACTATCAGATATCGATCATAATAATGGTTTGGTTTTGAAGTGTAACGGTTCTATGAAATGCGTCACTGACCAAGACCCTCTTTTTGATCCATTGGAGGAACAAGTGTTATCTGAATCAGCATTGACCTCATTGTGCATAATGAACAATGCAATGGAAAATCAACATTCTAATCAAGTGATTATGGCAGAAGCTGATTTTCCATCAAATTCTGAGGTATCCAAGAATTTGTTAGAGCGAATTGATGTGTCAGAAGAGTTCTTGAACTTCACTTCATTGGACGAAATTTGCCAATGGTTTGATGCTTCACAAGAGGATAATAACTCAAACACATTTCCTGAATCAATGCAATGTGATGCTACTTCCTTTTCTTGGAAATCAGTTAAGGATAGCTATGAGAATTGTCTATTGGGAAGCATGGAACCCGAGTTGAATTTGATTGCACCAGTGGCGATGAGTTCTGCTGATGATACTGCCAGCTTTGAATGCCTATCAGAGTTTGATTTTGATGCGCTAACAGGCTTATTGTCAGATTCATCAATTGAAGAGCTTTTGAATTGTGAAGAAGCAAATTGCAACAACCCTTTGAATAATGGTTCTAGTGCTGTTTTGGAGTTATCATCAGAAAATAATAAAATGGAGATGATGGAGAACATTTCAAATCCAATGAACTTCACAAAAAATCTTGCTTGGTTTCAAGCTAGAAATAACTTGACCCAGCCGGTTCCGGATTTGGACACAGCAAACAAAATCAAGAGAAAGAAAGAGGAGCCGAAAAAACCTAGCAAGAAGAAGGACAAGGCAGGGGAGTGTAGTCGGCCACGACCAAAAGATCGCCAGAGGATTCAAGACTGCATTCAACAATTGAGAACAATCATCCCTGGCAAGGATGTTAAAGAGTGTAGCATTGATAATTTGTTAGAGTGCTCCATCAGATACATGAGTTTCTTGTCAAGCACTGCACACTATGCAAACAAGCTACAAGAACCAGATAAGCCTAAGGCAAATGGAGTGGTTCTACAAGAGAGTAGTGTGGAAGGTAGCAAACATTATGGAACATGGTCATTTGAAGAGCCACATCAAACATTGTTATGCCCAATTATAGTTGAGGATATGGCTCATCCTGGCCAAATGCTTATAGAGTTGCTTTGTGAGGAGGAAGGGTTCTCTCTTGAGTTGGTTGACACAATTAAGGGTCTTGGTTTGAATATCCTGAAAGCAAAGATGGAAACAAGGAACAGAAAACTATGGGCACGCTTTATCGTTGAGGCCAATAGACATGTGACAAAGATAGATGTGTTTTGGTCCCTTCTCCATCTTGTAGAGCAGAAAAACTCCTCAAGAACTGGAATGGATTCATCAACTAATAATAACAAACATTGCAATGAAATGAATGATGGCAGTGTTTCAAGATTGGACAAACAACAACAAGAGAAAGAGAGTTGCAACTTTTTTATGTCCATGACAGAGGCACTAAGCTTCAGTGGTTGA 1620 0.3864 MDSKNYDLDEFFPSISFDCLYDPNPNNPSVFIYELDSLHESQLLLSDIDHNNGLVLKCNGSMKCVTDQDPLFDPLEEQVLSESALTSLCIMNNAMENQHSNQVIMAEADFPSNSEVSKNLLERIDVSEEFLNFTSLDEICQWFDASQEDNNSNTFPESMQCDATSFSWKSVKDSYENCLLGSMEPELNLIAPVAMSSADDTASFECLSEFDFDALTGLLSDSSIEELLNCEEANCNNPLNNGSSAVLELSSENNKMEMMENISNPMNFTKNLAWFQARNNLTQPVPDLDTANKIKRKKEEPKKPSKKKDKAGECSRPRPKDRQRIQDCIQQLRTIIPGKDVKECSIDNLLECSIRYMSFLSSTAHYANKLQEPDKPKANGVVLQESSVEGSKHYGTWSFEEPHQTLLCPIIVEDMAHPGQMLIELLCEEEGFSLELVDTIKGLGLNILKAKMETRNRKLWARFIVEANRHVTKIDVFWSLLHLVEQKNSSRTGMDSSTNNNKHCNEMNDGSVSRLDKQQQEKESCNFFMSMTEALSFSG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02139 539 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 96 521 IPR043561 GO:0003700|GO:0006355
Aip09g02139 539 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 96 521 - -
Aip09g02139 539 MobiDBLite consensus disorder prediction 290 324 - -
Aip09g02139 539 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 309 360 IPR011598 GO:0046983
Aip09g02139 539 MobiDBLite consensus disorder prediction 284 324 - -
Aip09g02139 539 MobiDBLite consensus disorder prediction 489 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02139 Aip-Chr9 92784034 92786281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02139 288 486 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 41.827 2.58e-44 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02139 - - ahf:112709220 904.82