Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02132 ATGACCTCTTCTTCTTCCTATTATTCTAGAAGCTTCTCGGCGAACCCGCGGGACTACAAGCTTCTGGAAGAAGTCGGATTCGGCGCCAGCGCAACCGTCTACCACGCCGTTCACATCCCCTCGAACGAGCAAGTCGCCGTGAAGGTCCTGGATCTGGACCGATGCAACAGCAACTTCGACGACATACGGCGAGAGGCTCAGACCATGAGCCTCATCGATCACCCCAACGTCGTCCGCGCCTTCTGCTCCTTCGTCGTCGACCGGAGTCTCTGGGTGGTTATGCCGTTTATGGACCAAGGCTCCTGCCTACACCTCATGAAGGTCGCATACCCCGACGGCTTCGAAGAAGATGCCATTGGATCCGTACTCAAGGAGACACTCAAGGCTCTTGACTACCTCCACCGCCATGGCCACATCCACCGCGATGTTAAGGCTGGGAATATACTTTTGGATTCCAATGGCGATATCAAACTTGCTGATTTCGGTGTTTCTGCTTGCATGTTTGATGCCGGCGATAGGCAGCGGTCCAGGAACACTTTTGTTGGAACTCCTTGCTGGATGGCACCGGAGGTGCTGCAGCCTGGAACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTTGGGATTACGGCGCTTGAGCTGGCTCATGGTCATGCACCTTTCTCGAAATATCCTCCCATGAAGGTGCTTCTAATGACCATACAGAATGCCCCTCCGGGCCTTGATTATGATCGGGATAGGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTAAAAGATCCGACAAAGAGACCGACGGTGGAGAAGTTACTGAAACATTCTTTCTTCAAGCAAGCCAAGCCTCCTGAGCTTTCTGTAAAGAAATTGTTTGCCGACTTACCTCCACTTTGGAATCGCGTAAAAGCTCTGCAGCTTAAAGATGCTGCTCAACTAGCACTAAAGAGAATGCCTTCTGCAGAGCAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCATGGAACTTTGATCTTGATGATTTGAAAGCTCAGGCTTCATCGGTAGAGAACAATGATGGTTTTGCCGAGATGAGGGAAGAAGATGAACCCAAAAGTGTTAGCGAGTACAAGGATACAACTGATTTTCAGCTTAATGTGGACAAGAATTCAGAAAACTCACAAGAAGATGAGTTTGGACTAGAAGTAGGTGTTTATCATCACACACCACAAAGTGAGAAGAGAAATGGATTGGTTGCCGAGGCATCACCTTCTACCCTAGATAAGGATACAGGATTGAGCAAGACCAAAATTCAATCAACGAGGATTCGTAAAACCCAGAGTGGGCCACTGGTGCCAGGCACAGTTCTTGGTCATTCTTTACCTGATAGAGGGTCTACATTTGAAAGGTTAGAGAGTGAAAATCAGTCATCAGGTGACAAAAGTAGTCGTGATTCCCGACGAGCTCCCAACTTTAGTGGTCCATTGATGCTTCCAAACAGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATACAGAGATACTTTGGATGATAAATCTAAGACTAATCTAGTGCAAATCAAAGGACGATTCTCAGTGACTAGAGAGAATTTAGATCTGGTGAAGGATATCCCCGTAAGTTCAGTTTCACGCAGATCTTCACAGGGATCACCGCTGAGGAAATCTGCCAGTGTTGGTGATTGGATGCCGGATGCCAAACAAATGCCAGTTGGTCAGTCATCAAAAGATTCTGCGAATATCAATGTTTCTGCCTCACCTCTTATACCTCACCTTCAAAACCTTTTTCATCAGACATCTATTCAACAGGATCTCATAATGAATCTTTTGAATAGCTTGCAACCTGCCGAGGCAGTTGATGTTAAAATTTTCAGCTTCTCAGAATGGAAAGTTGCCACCATTACCTCGCACTCCAGAGAACAATGGGAATATCGAAACAACAGCCTCGGAGAGGGAGCAACTGCTACTGCTAAAAGTTTCAGAACTTCAAGCACGGATGATGAATTTGACCGATGA 2043 0.463 MTSSSSYYSRSFSANPRDYKLLEEVGFGASATVYHAVHIPSNEQVAVKVLDLDRCNSNFDDIRREAQTMSLIDHPNVVRAFCSFVVDRSLWVVMPFMDQGSCLHLMKVAYPDGFEEDAIGSVLKETLKALDYLHRHGHIHRDVKAGNILLDSNGDIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDPTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDLDDLKAQASSVENNDGFAEMREEDEPKSVSEYKDTTDFQLNVDKNSENSQEDEFGLEVGVYHHTPQSEKRNGLVAEASPSTLDKDTGLSKTKIQSTRIRKTQSGPLVPGTVLGHSLPDRGSTFERLESENQSSGDKSSRDSRRAPNFSGPLMLPNRASANSLSAPIKSSGGYRDTLDDKSKTNLVQIKGRFSVTRENLDLVKDIPVSSVSRRSSQGSPLRKSASVGDWMPDAKQMPVGQSSKDSANINVSASPLIPHLQNLFHQTSIQQDLIMNLLNSLQPAEAVDVKIFSFSEWKVATITSHSREQWEYRNNSLGEGATATAKSFRTSSTDDEFDR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02132 680 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 634 - -
Aip09g02132 680 ProSiteProfiles Protein kinase domain profile. 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02132 680 MobiDBLite consensus disorder prediction 407 517 - -
Aip09g02132 680 MobiDBLite consensus disorder prediction 496 511 - -
Aip09g02132 680 Pfam Protein kinase domain 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02132 680 MobiDBLite consensus disorder prediction 425 446 - -
Aip09g02132 680 SMART serkin_6 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02132 680 MobiDBLite consensus disorder prediction 552 587 - -
Aip09g02132 680 Gene3D Phosphorylase Kinase; domain 1 8 96 - -
Aip09g02132 680 SUPERFAMILY Protein kinase-like (PK-like) 17 331 IPR011009 -
Aip09g02132 680 MobiDBLite consensus disorder prediction 359 394 - -
Aip09g02132 680 MobiDBLite consensus disorder prediction 661 680 - -
Aip09g02132 680 MobiDBLite consensus disorder prediction 463 485 - -
Aip09g02132 680 CDD STKc_OSR1_SPAK 18 280 - -
Aip09g02132 680 MobiDBLite consensus disorder prediction 355 394 - -
Aip09g02132 680 Gene3D Transferase(Phosphotransferase) domain 1 100 329 - -
Aip09g02132 680 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 634 - -
Aip09g02132 680 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02132 Aip-Chr9 91650348 91657767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02132 10 629 MAP Kinase Kinase Kinase Kinase AT4G24100 66.032 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Aip09g02132 Pkinase 7.4e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02132 - - gmx:100783699 1012.29