Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02123 ATGAAGGGCGGTGGGCGATCGAACCGCCCGCAGAGCTCGGACCCCCCTCCGCCGCCGGACGAGTGGGTGGACGGGTCGTGGACGGTGGACTGCATCTGCGGCGTAACCTTCGACGACGGCGAGGAGATGGTCAAGTGCGACGAGTGCGGCGTCTGGGTCCACACCCGCTGCTCTCGCTACGTCAAGGGAGACGACACTTTCTCCTGCGACAAGTGCAAGTCCAAAACTGCAGCCACCACCGCTAACGCCACCCCAAACCACCACATTAACCACCAAATCGACACCGTCGTTAACGGAACGGAAGAGACCGAGGTAGCTCAGTTTCTGATTGAGCTCCCAACGAAGACAATCTCCATGGAGAACGGCAACATCAACAATAATAATAACAATAACAATGATAACGGTTCTTTATCTCGCAGGCCATTTAAGCTTTGGACTGATATTCCCATGGAGGAGAGGGTTCATGTTCAGGGTGTACCCGGTGGGGACCCTGCGCTCTTTGGTGGGTCCGGGTTGTCTTCGATTTTTGGGCCACAGCTTTGGAAGTGCACTGGTTATGTTCCCAAGAAGTTCAATTTTAGGTATAGGGAGTTCCCTAATTGGAACGATGAGGATGATGATGGGGGAAAGGGTGCTGGGGTTTTGTTTTCCTTCTCTAAGGAGACTGCTGCTGCTGCAGCTGCCGCCACTGCTACCACGGTGGTGGCTAGGCCGCCAGTTGGGGGCGCTTTGGCGGATATGAAAGGTGTTGATGAGGAGCGGAAGGGGGGATTGAAGGATGGGGAGAAGGTGCATAGTGGGGTGAAGAAGGAGAGGAGCTTGCTGAGGCCGTTTGTTGTTCATAGCAGTAAGCAGCAGCGCAAGAAGGAGGAGGTTGGCAGTTCCAATTCGAGAGATCGGAGTGGGAAGAAGCGGGTTAGGAGTTCTTCTGAGAAAGAGATTGATCCCAAGAGGAGGAGCAGTTCGCATTCCTCTAAATCAGCGTTTACACCCACCAGTGATGCAAAACCATTGGAATTTTATGAAGACAGAGGTCTAAAGGTTTCCAAGGATGACACTCGAAGTATGAAGAATAAGAACTTGAAAGACATAGTGGTTCAGGAGCATATTTCTAATGATTGTTTTGCTGCGGGTACCATCATGGAGGAACCAACTAACAACATGGCAACTACTGAGGATTCTTCAGAACCATTATATGCTGACACAGCAAGGCATAATTTTTCTATTGGAGATGTGTTACCAGAAGAGAAGGCTGGCAATAAAGGTCCTAGTTTGGTTGAGATGCCCTCGAAGCCTGATGATGCTGTTACATCTGTTTTAAAGCATAATGGTGTTGCAAATGCTTCGAGTAAAGGAAAGGATGGAGATTGCTTGGCGGTTGATAGTGCAGACAATTATTTAGCAGTAAGAAGCTCTATTGCTCCCCATGGAGGAGGTCCTTGTGGTTCTGCACCAGAAAATATAGATAAACAAGTTTCTCAAGAAATTGACTGTAACCTGTGGCCTACCTCTGCAAAATGTGATAAGAGAGAAGATGGCGATAAGGATAATTGTAGGAAGCTCTCTAATGTTCATTCTTCCCCTGTCAATGATGCAAAAGATAACGAAAAACCATCAGACAACATATATGATATTGTTAAAGTGAATGATGCTGTGATTACCAGTTTACCATCATGTGTAAAGAAGTTGGCAGATGTTGATAGATTGTCGGTAGTTGTCACTGATGATCATACCAGTAAATCTGAGGAATTGTCTGGTATTTGTAACAGAAAACAACCGGTGGGATCTGAAGGTTCCATAGAAACACAGAAGAGTATTTCAGAAACAAAAGATGGCTCAGAATCTATGAAGGATCCACATAAAATGTCAGCATGTCTTGGAAAGTCATCTGCATCTCCAACATCGTCAACCATTAATGCCAAATCTTTAGCTCACGACTTAAAATCTGAAGATATTGAAAGCCCTAATCCTTTTACAAAGCAAGCAGTGATGTCGGATAGTAATATTCACTTAAAGAAGGAAAGCAGCCCAAGTGATGCTGTGAGGGATGAAATCTCTAGGAAGTCAGTAAGAGAACGGCCAAAATCCTCTTTGAATGCCAGTTCAAAGGGATTGCATTCTAGCCGAAGTACACAAAATTCTGTTTCAAAGCAAGTAAATTCAGATGCGAGAGATTCTGTTCATACTTCATTGTCTAAAGCATCTTTGGCACATCAGACTGTAAGTATTTTGGGCTCAAGTGAGACTAATGTGTCATTGCAACATCAGAAGGCGTTACAAGTGCAAAGCAAAGGTTCATCTTCAGTGCCACCAAAAGCTGAAAAGATTAACCATACCAATATGAATACTTCCTCTAATAAGTTGAATCAAAATCATGGACCATCAGTTAATCCTCCTTCAACATCAAATAATTCAATGCTGAGTGATGAAGAGCTTGCCTTGCTGTTGCATCAAGAACTGAATAGTTCACCCCGTGTACCTCGTGTGCCCCGAGCACGCCATGCAGGTAGCTTGCCACACTTGACTTCTGCTAGTTCTACAAGCATGTTAATAAAGCGAACATCATCAGTTGGAGCAAAGGATCATTGTTTGGTTTCTAGACGGAAGTACAAAGATTCATCTCGAGAAGGGCTTTCCAGTTCTCGTGAACTTGAAGAGGAAACAAAAAGGATAGAAAAGGAGAAGGTTCCATCCTCTGATCATAGGAAGCAAGATATAGCACTTGCAGAAGATGCTTCCGAGAAGGAAGAAGGTTGTGGATCTTTGACAGCTGGGAACTCTTGCACAAATAATGCTTCTACCACTGCTGCCATTGCAAAGAGTAGCCCGTCCTCCCCTCCCAATGATCAAAATTTTCCATCTATTCGTAACTCTCCTAGGAATATATCTGATGATGATACAGCATCTGCTGGAAGGCCAGTTCATCGGACCTTACCTGGCTTAATCAATGATATTATGAGCAAAGGCAGGCGCATGACATATGAGGAACTCTGTAATGCTGTTTTACCGCACTGGCATAACTTAAGGAAGCATAATGGAGAGCGTTATGCATACTCAAGTCACTCTCAAGCTGTCCTTGATTGTTTGAGGAACCGACATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCCAATAGAAAAAGGCGTAAACTGGATGCTGAAGAATCCGATGATAATGGATATGGCAAGGGAAGAACCACAAAAGAAGCCGATGGGAAGAACTTCAAGTTGCAAAAAGAAGACTTCCCTAAAGGCAAGCGCAAAGCTAGAAAACGCAGGCGCCTTGCTCTTCAGGGAAGAGCAGTGAAGGATGTCAGGAGGAGACAAAAAGCTGACTCGTTAAGTGATGAAGATACTGCTGGATTCTCCAATTCTAGTGAAGATAGCATGTTTAGTGAGGATGAAGTTGGTGGAATAGGTCCAACAGGAAGTACTTCAGATGAGGCAGGTAGTGCCTAA 3468 0.4513 MKGGGRSNRPQSSDPPPPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFSCDKCKSKTAATTANATPNHHINHQIDTVVNGTEETEVAQFLIELPTKTISMENGNINNNNNNNNDNGSLSRRPFKLWTDIPMEERVHVQGVPGGDPALFGGSGLSSIFGPQLWKCTGYVPKKFNFRYREFPNWNDEDDDGGKGAGVLFSFSKETAAAAAAATATTVVARPPVGGALADMKGVDEERKGGLKDGEKVHSGVKKERSLLRPFVVHSSKQQRKKEEVGSSNSRDRSGKKRVRSSSEKEIDPKRRSSSHSSKSAFTPTSDAKPLEFYEDRGLKVSKDDTRSMKNKNLKDIVVQEHISNDCFAAGTIMEEPTNNMATTEDSSEPLYADTARHNFSIGDVLPEEKAGNKGPSLVEMPSKPDDAVTSVLKHNGVANASSKGKDGDCLAVDSADNYLAVRSSIAPHGGGPCGSAPENIDKQVSQEIDCNLWPTSAKCDKREDGDKDNCRKLSNVHSSPVNDAKDNEKPSDNIYDIVKVNDAVITSLPSCVKKLADVDRLSVVVTDDHTSKSEELSGICNRKQPVGSEGSIETQKSISETKDGSESMKDPHKMSACLGKSSASPTSSTINAKSLAHDLKSEDIESPNPFTKQAVMSDSNIHLKKESSPSDAVRDEISRKSVRERPKSSLNASSKGLHSSRSTQNSVSKQVNSDARDSVHTSLSKASLAHQTVSILGSSETNVSLQHQKALQVQSKGSSSVPPKAEKINHTNMNTSSNKLNQNHGPSVNPPSTSNNSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPHLTSASSTSMLIKRTSSVGAKDHCLVSRRKYKDSSREGLSSSRELEEETKRIEKEKVPSSDHRKQDIALAEDASEKEEGCGSLTAGNSCTNNASTTAAIAKSSPSSPPNDQNFPSIRNSPRNISDDDTASAGRPVHRTLPGLINDIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNSNRKRRKLDAEESDDNGYGKGRTTKEADGKNFKLQKEDFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLSDEDTAGFSNSSEDSMFSEDEVGGIGPTGSTSDEAGSA 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02123 1155 MobiDBLite consensus disorder prediction 627 643 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 241 336 - -
Aip09g02123 1155 ProSitePatterns Zinc finger PHD-type signature. 31 72 IPR019786 -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 508 538 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 1 23 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 935 976 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 1040 1155 - -
Aip09g02123 1155 SMART PHD_3 30 73 IPR001965 -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 247 322 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 695 731 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 823 904 - -
Aip09g02123 1155 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1149 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 754 805 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 1101 1118 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 862 904 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 584 731 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 1119 1134 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 654 671 - -
Aip09g02123 1155 PANTHER UNCHARACTERIZED 1 1149 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 1040 1087 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 672 694 - -
Aip09g02123 1155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 80 IPR013083 -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 839 854 - -
Aip09g02123 1155 MobiDBLite consensus disorder prediction 935 965 - -
Aip09g02123 1155 SUPERFAMILY FYVE/PHD zinc finger 20 76 IPR011011 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02123 29 72 PHD Transcription Factor Family AT5G22260 44.681 4.98e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02123 - - gmx:100810855 1374.38