Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02113 ATGAGGTTACTGATGGGGACTGAACTCATGAGAATATGTGTTAAAGAAGATAATGATGAGTTTCCTTCAGTACCACCTGGTTTTGAGTCATATACATCTTTCTCGCTGAAAAGGGTAGAAGACAATGAGAAACAAAATGATAAAAATATTACCAGTTCTTCAGTATCCACAAGTGCGTCTGAATCAAATTCGACACAGGTGGTTACCAATATTCAAGTTAGTGATACTGCAAAAGTTCCTAGGACGCTGAGACGCAGACCTTGGATTAATTATGGACAATATGAGAATAGTTATGAGGAAGACTCTGATTGTGAGCGGCTTGATCAAAATTTCTCCTCAAGACCTTGTCTTCCCAGGGGAGTTATCCGTGGTTGTCCAGATTGCAGTAATTGCCAGAAGGTTGTTGCAAGATGGCGACCAGAAGATGCTCGTAGGCCAAAGCTTGAGGATGCTCCTGTTTTCTACCCCACAGAAGAGGAGTTTCAAGATACTTTAAAATATATATCGAGCATTCGCTTCAGTGCTGAACCATATGGAATTTGTCGCATTGTTCCCCCTTCTTCTTGGAAACCCCCTTGTCCTCTCAAGGAAAAAAGTATATGGGAGGGTTCTAAATTTGCTACCCGTGTTCAGAGGATTGATAAACTTCAGAATCGTGAATCAGTGAGAAAGATTTCAAGGTTTCAAAGCAATATGAAAAGGAAAAGGAGAAGGGTCACAAGAATGGGAATGGAAAATGGCACTGTTGGAGGACTGGACATGGGACTTTGTGAAGCTGAAAGTTTTGGGTTTGAACCTGGTCCACAATTTACCTTGGAAACATTTCAGAGATATGCCGATGATTTCAAGGATAAATACTTCAGAGAAAATGAGAATGTGTCTCATTTGGGAACCAATACAACAAATTTAAACAGCACCTTTGAGCCTTCTGTGGAAAACATTGAGGGTGAATATTGGCGGATGGTTGAGAGTCCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGATCTGGAAACAGGGGTTTTTGGGAGTGGTTTTCCTAGAAATTCTAGTAATGTTGGTTCCACGTCACATGAAGATTATATAAAGTCTGGCTGGAATTTAAATAACTTTGCGAGGTTACCTGGATCCTTGCTCTGTTATGAAAGCAGTGATATATCTGGTGTTCTAGTGCCATGGTTGTACATAGGAATGTGCTTTTCCTCCTTTTGTTGGCATGTGGAAGACCACCATTTGTATTCCTTGAATTATATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGCAAAGATGCTTGCAAATTGGAAGAAGCCATGAGGAAGCATTTACCAGAACTATTTGAAGAACAACCTGACTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCCATCCTTAAGTCTATGGGAGTGCCAGTTTATAGGTGTGTTCAAAACCCGGGAGAATTTGTTCTGACATTTCCTCGAGCCTATCACTCTGGCTTCAATTGCGGCTTCAACTGTGCAGAGGCTGTTAATGTGGCTCCAGTTGACTGGCTGCCGCATGGGCATATTGCTATAGATCTGTATAAGGAGCAGCGGCGCAAGACTTCTATATCCCACGATAAGCTATTACTGGGGGCTGCAAGGGAAGCTGTAAGAGCCCAGTGGGAGCTTAATTTGCTGAAAAGGAATACTTCTGATAACCTACGATGGAAAGATGTCTGTGGAAAGGATGGTCTTCTAGCAAATGCACTCAAGACACGTGTTGAGATGGAGCGAGTCAGAAGGGATTTTCTATGTAATTCGTCACAAGCATTAAAAATGGAGAGTAACTTTGATGCTACAAGTGAAAGGGAATGCAACATTTGCTTTTTTGACTTACACTTATCTGCAGCTGGTTGTCGATGTTCCCCTGATAGATATGCTTGCTTGGATCATGCAAAGCAGTTTTGTTCATGCTCTTGGGATTCCAAATTCTTCCTCTTTCGCTATGATATCAGTGAATTAAATATTCTTGTTGAGGCATTGGAAGGAAAACTAAGTGCTGTATACAGATGGGCAAAATTAGATCTTGGGCTTGCACTGACTTCTTATATTTCAGCAGACAAGGAAAAAGTACTCAAGGAATTGAGATTTCAGTCATCAAACTTGTCTCATTCTCCCAAGGCCAATGTGCATAAAGAGGCGACTTTGCATCAATCAAATGAATTTGTTGAAGACACACAATTAATGGATATCCCAATAGTGGATCAATCAAATTCAGAAAAAGGCAAAGATCAGAGCTTCCCTCAACAAAGGAAATCTGTAGAAGTTGTGTCTCCTTTGAGTCAGAAGAAGGAACGCTTGACACTTGATAATGTACAACCTGCAAATGAGATGGGTAACCGTAAGACTTTTGTCAATAAAGAAGGATCTGCTAATTGCAGAATAAAGCTGAGTCGCCTTGGTTGCCAAACATCTCAAGAAGATTTGTCATTTGTTCTATGTCTTCCTGTGGCTCAGGCTGAGCATGGAGGAGGGAAAAGTTCACTACACAGACGTAACAGTAGTATTATACATCCTAGTGAAGATAAAGTTGATGACATGAAGCCAGATACCAATGGACGGAAGGAGCTTTCTCAAATAGATAAAGCAAGTTCATGTAATAATATGGAAAATACTAAGTTGATCATCCGGATGAAAGATCCTGCCATTATGGGTGACAAGGAAGCTATTACATTTCCCCAAGCAGATAAGAGTTCTGATTCAACTCAGCTTTTGCATGTTAAACAGGAATGCGAAGAAAACAGGGAACCAGCAATAGCTTCTACCCTGATAGATCTTTCTTGTCAAGTTGGTCTTACTGCTGCAGAATCAATTAGAAGTATTCCTGACTCTTTAACTGCAGAGACCAGCAACCGTTGCCAGGAAAGTTCTCTGAGTTCTCTAAATCCACAACATTCTGTCATCACCAAGGTTAAGAATGAGGATACTCAAGAAAAGCTTGGCGGGTGTAGCACTTCTAGTATAGCAGAGAGCGTAAGAGCTGTTAATGGAAACACATGCAGTCTTAACAATTACCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTCCGGCGTATCAACTGCAATGTTGAGCCTTTAGAATTTGGAGTTGTGCTTTCTGGAAAGTCATGGTGCAGCAGTCAGGCTATATTTCCAAAGGGATTTAGAAGCCGTGTTAGATACATAAATGTCTTAGACCCATCGAATATGTGCTATTACATTTCAGAAATTCTTGATGCTGGACATGACAGGCCTCTGTTTATGGTTTCCTTGGAAAATTGTCCAAGTGAGGTCTTCGTTCACATTTCAGCTGCAAGATGCTGGGAACTAGTAAGAGATAGAGTGAACCAAGAGATTGCAAAACAACATAAGCTGGGAAGGAAGGGTCTTCCTCCTTTACAGCCTCCCGGAAGCCTTGATGGCTTTGAAATGTTTGGGTTTTCTTCACCCGCCATAGTGCAGGCTATTGAGGCACTGGATAGAAGTCGAGTCTGTAGTGAATACTGGGATTCTCGGCCATATTCTCGGCCTCAAGGGCAGATTTCACAACCTCGCCAAACCAATTCAAATGGTGGAAATGGTCAAGGGGTTCTTGTGAATCAGCACTTGCCCAATGGTGGTGTTGCAGCATTACAGAGCTTATTTAGAAAGGCCAATGCTGAAGAATTGAACTCACTGTACAGCATTTTTAGTGATAAGCCAGAGGCTGATCGGAACCTAATCACGCGTCTTCTAAATGAAGAGATTCACAAATCACAACCGTCTTAG 3780 0.4169 MRLLMGTELMRICVKEDNDEFPSVPPGFESYTSFSLKRVEDNEKQNDKNITSSSVSTSASESNSTQVVTNIQVSDTAKVPRTLRRRPWINYGQYENSYEEDSDCERLDQNFSSRPCLPRGVIRGCPDCSNCQKVVARWRPEDARRPKLEDAPVFYPTEEEFQDTLKYISSIRFSAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFATRVQRIDKLQNRESVRKISRFQSNMKRKRRRVTRMGMENGTVGGLDMGLCEAESFGFEPGPQFTLETFQRYADDFKDKYFRENENVSHLGTNTTNLNSTFEPSVENIEGEYWRMVESPTEEIEVLYGADLETGVFGSGFPRNSSNVGSTSHEDYIKSGWNLNNFARLPGSLLCYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSMGVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIDLYKEQRRKTSISHDKLLLGAAREAVRAQWELNLLKRNTSDNLRWKDVCGKDGLLANALKTRVEMERVRRDFLCNSSQALKMESNFDATSERECNICFFDLHLSAAGCRCSPDRYACLDHAKQFCSCSWDSKFFLFRYDISELNILVEALEGKLSAVYRWAKLDLGLALTSYISADKEKVLKELRFQSSNLSHSPKANVHKEATLHQSNEFVEDTQLMDIPIVDQSNSEKGKDQSFPQQRKSVEVVSPLSQKKERLTLDNVQPANEMGNRKTFVNKEGSANCRIKLSRLGCQTSQEDLSFVLCLPVAQAEHGGGKSSLHRRNSSIIHPSEDKVDDMKPDTNGRKELSQIDKASSCNNMENTKLIIRMKDPAIMGDKEAITFPQADKSSDSTQLLHVKQECEENREPAIASTLIDLSCQVGLTAAESIRSIPDSLTAETSNRCQESSLSSLNPQHSVITKVKNEDTQEKLGGCSTSSIAESVRAVNGNTCSLNNYRQKGPRIAKVVRRINCNVEPLEFGVVLSGKSWCSSQAIFPKGFRSRVRYINVLDPSNMCYYISEILDAGHDRPLFMVSLENCPSEVFVHISAARCWELVRDRVNQEIAKQHKLGRKGLPPLQPPGSLDGFEMFGFSSPAIVQAIEALDRSRVCSEYWDSRPYSRPQGQISQPRQTNSNGGNGQGVLVNQHLPNGGVAALQSLFRKANAEELNSLYSIFSDKPEADRNLITRLLNEEIHKSQPS 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02113 1259 Pfam JmjC domain, hydroxylase 393 509 IPR003347 -
Aip09g02113 1259 MobiDBLite consensus disorder prediction 749 768 - -
Aip09g02113 1259 PANTHER JUMONJI 14-RELATED 81 760 - -
Aip09g02113 1259 PANTHER JUMONJI 14-RELATED 982 1256 - -
Aip09g02113 1259 MobiDBLite consensus disorder prediction 1177 1202 - -
Aip09g02113 1259 Pfam F/Y rich C-terminus 1088 1172 IPR003889 GO:0005634
Aip09g02113 1259 Gene3D - 1033 1170 - -
Aip09g02113 1259 Pfam F/Y-rich N-terminus 1039 1081 IPR003888 GO:0005634
Aip09g02113 1259 PANTHER LYSINE-SPECIFIC DEMETHYLASE 982 1256 - -
Aip09g02113 1259 PANTHER LYSINE-SPECIFIC DEMETHYLASE 81 760 - -
Aip09g02113 1259 SMART cupin_9 363 526 IPR003347 -
Aip09g02113 1259 SMART fyrc_3 1090 1184 IPR003889 GO:0005634
Aip09g02113 1259 ProSiteProfiles FYR domain FYRC motif profile. 1086 1176 IPR003889 GO:0005634
Aip09g02113 1259 SUPERFAMILY Clavaminate synthase-like 361 553 - -
Aip09g02113 1259 ProSiteProfiles JmjN domain profile. 151 192 IPR003349 -
Aip09g02113 1259 SMART fyrn_3 1040 1084 IPR003888 GO:0005634
Aip09g02113 1259 Pfam jmjN domain 152 185 IPR003349 -
Aip09g02113 1259 MobiDBLite consensus disorder prediction 749 770 - -
Aip09g02113 1259 Pfam C5HC2 zinc finger 616 666 IPR004198 -
Aip09g02113 1259 Gene3D Cupin 136 510 - -
Aip09g02113 1259 MobiDBLite consensus disorder prediction 48 66 - -
Aip09g02113 1259 ProSiteProfiles JmjC domain profile. 363 526 IPR003347 -
Aip09g02113 1259 SMART JmjN_1 150 191 IPR003349 -
Aip09g02113 1259 MobiDBLite consensus disorder prediction 39 66 - -
Aip09g02113 1259 ProSiteProfiles FYR domain FYRN motif profile. 1026 1084 IPR003888 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02113 Aip-Chr9 90037233 90046755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02113 5 1254 JUMONJI Transcription Factor Family AT1G08620 54.652 0.0 1260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip09g02113 JmjC 4.7e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02113 - - gmx:100800271 2007.26