Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02111 ATGGCAAGGGGAGGTGGTGGCACGGTGGCGAGCGTGACTGCTCCGTTGTTAATGGTGAGCGGGTTCTCGAAGGGACCACAGGGCGAGCTTGCGATGGTGGTTTCAAGAACACCAAAGTATCTAGTCGAAAACAAGGATTTTCAGCACATTTTGTGTGTTCTAAACATAAACATAGATGGAAAGCAGAAGATTATGTTTGCTATAACCTTCATCAAAGGTATCGTAAGGCAATTCACCAACATCTGTTGCAAGAAGGTCGATATCCGCATGAACAAGAGATGGCAAGTACTCTCAGCCTCTCAGGTAGTGACCAACGTCCTTGACATGAAGCTCAGGGATGACTACTTGGAGAGACTCAAGAAAATCAGAATCTTTGGACTCGTTGGCATAACTGAGAAGACTCATCCTATATTTGCAATAAAGTTGAACTCCCATGTCTTGTGGTTTAGCCTGTGTTGA 459 0.451 MARGGGGTVASVTAPLLMVSGFSKGPQGELAMVVSRTPKYLVENKDFQHILCVLNINIDGKQKIMFAITFIKGIVRQFTNICCKKVDIRMNKRWQVLSASQVVTNVLDMKLRDDYLERLKKIRIFGLVGITEKTHPIFAIKLNSHVLWFSLC 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02111 152 PANTHER BNAC06G07900D PROTEIN 25 100 - -
Aip09g02111 152 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 100 123 - -
Aip09g02111 152 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 25 100 - -
Aip09g02111 152 PANTHER BNAC06G07900D PROTEIN 100 123 - -
Aip09g02111 152 Gene3D - 39 122 - -
Aip09g02111 152 ProSiteProfiles Ribosomal protein S13 family profile. 53 102 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aip09g02111 152 Pfam Ribosomal protein S13/S18 53 102 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aip09g02111 152 SUPERFAMILY S13-like H2TH domain 52 121 IPR010979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02111 Aip-Chr9 89965867 89968459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02111 41 123 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 52.137 1.97e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02111 K02964 - gmx:100306474 105.531