Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02102 ATGTGTCATTTTCACTTTTCTGATATTGACATTGCATTTGAGTTCTACGATAGATATGCAAGGACAAGAAGCTTTAGTGCTCAGAAGAACAAGACTAGGAAGAGTTGTGCAGGCGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCAAAAAATAATTATGGCAATGGAAACTTTAAGAAAAAACCTACACCAGAGACAAGGTGTGACTGCAGTGCAATGATGGAGATTCGTCTGGATGCATCTAGTGGTCATTGGTTTATTTCTTATTTTTTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGA 324 0.3765 MCHFHFSDIDIAFEFYDRYARTRSFSAQKNKTRKSCAGVLKLKNFVCHREGFRPKNNYGNGNFKKKPTPETRCDCSAMMEIRLDASSGHWFISYFLMNTIIRFWILG 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02102 107 Pfam FAR1 DNA-binding domain 14 95 IPR004330 -
Aip09g02102 107 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 96 - -
Aip09g02102 107 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 4 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02102 Aip-Chr9 88983146 88983469 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g02102 FAR1 1.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02102 - - adu:107486389 171.014