Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02093 ATGAGGATGATAGACCAACACAACTTGGTACTTTGCGTAGCTTTATCGTCACTTTGCATTGCTTTTGCTCCTTGGATCTCTATTGAAGCTGCCCCTCCATCCTCTCTTATCACACAACTCCCTGGCTTCAAAACTTCTTTCCCATCCAAGCATTATTCCGGGTATATTGGGAAGAACCTGTTCTACTACTTTGTAAGTTCCGAAAGAAATCCAGCAAAGGATCCAGTTGTTCTATGGTTGAATGGTGGACCAGGTTGTTCTAGCTTCGATGGCTTCGTTTATGAGCATGGGCCATTCAACTTTGAGGCTTCAAGAACGGAAGGGAATCTTCCCACCTTGCATATCAATCCATACAGCTGGTCTAAGGTTTCCAGTATTATTTATTTGGATTCACCTGCTGGGGTGGGTCTCTCTTACTCCAAGAATTCCAGCAAATACAACACTGGGGACTTACAAACTGCATCTGATACTCATGCTTTTCTCCTAAAGTGGTTTGAGGAATTCCCTGAATTTCTTGAAAATCCATTTTATATTTCCGGGGAGTCTTATGCTGGAATATATGTTCCCACGTTGGCTTATGAAGTGGTCAAAGGAATCAAGGGTGGTATTAAGCCCGTGATCAATTTCAAGGGTTATATGATTGGAAATGGTGTCACGGACAACACCTTCGATGGCAACGCTTTTATCCCATTTGTGCATGGGATGGGCCTCATATCCGACAGTATCTACGAGGAAGTAAAAGCTTATTGCAAAGGAAATGATGACGAAAGTGATATGTGCTCAAAGAGTTACCTAAAAGTTGACAGGGCCATTGAAGATCTTAATGTGTACAACATACTAGAGCCATGCTATCATAACTCAAATACAGGTTCAACAGGGAATGTGAGTTTGCCAACAAGTTTCAAGGAATTAGGGAAAAGTGAGAAGCCACACCCACACCCTGTGAGGAAGAGGATGTTTGGTAGGGCATGGCCCCTTAAAGGCACAGTCAAAGAAGGCCCAGTTACATTGTGGCCCCAGTTGGCTGAAGATGGCCACATTCCTTGTGTCAGTGATGAGGTAGCAACTTCATGGCTGAATAACCAAGAAGTCAGACAGGCCATCCATGCTAAACCGAAAAGTGTTGCGGGTCCGTGGGAATTATGCACTAGAAGGATATATTACAATCACGATGCTGGAAGCATGATTCCATACCACAAGAAACTAACCATCATGGGCTATCGAGCACTAATTTTCAGTGGTGACCATGATATGTGTGTGCCATTTACTGGAACTGAGGCATGGACACGATCTCTTGGATATAAGATCATAGATGAATGGAGACCATGGACCTCTAATGACCAAGTTGCTGGATACTTGCAGGCATACAATAACCACCTCATCTTCCTCACTGTCAAGGGAGCTGGACACACAGTCCCTGAATACAAGCCACGCGAGGCACTGGATTTTTACAGCAGATGGTTGGAAGGGAAATCCATATAA 1482 0.4393 MRMIDQHNLVLCVALSSLCIAFAPWISIEAAPPSSLITQLPGFKTSFPSKHYSGYIGKNLFYYFVSSERNPAKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEASRTEGNLPTLHINPYSWSKVSSIIYLDSPAGVGLSYSKNSSKYNTGDLQTASDTHAFLLKWFEEFPEFLENPFYISGESYAGIYVPTLAYEVVKGIKGGIKPVINFKGYMIGNGVTDNTFDGNAFIPFVHGMGLISDSIYEEVKAYCKGNDDESDMCSKSYLKVDRAIEDLNVYNILEPCYHNSNTGSTGNVSLPTSFKELGKSEKPHPHPVRKRMFGRAWPLKGTVKEGPVTLWPQLAEDGHIPCVSDEVATSWLNNQEVRQAIHAKPKSVAGPWELCTRRIYYNHDAGSMIPYHKKLTIMGYRALIFSGDHDMCVPFTGTEAWTRSLGYKIIDEWRPWTSNDQVAGYLQAYNNHLIFLTVKGAGHTVPEYKPREALDFYSRWLEGKSI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02093 493 PANTHER CARBOXYPEPTIDASE 15 492 - -
Aip09g02093 493 Gene3D alpha/beta hydrolase 30 303 IPR029058 -
Aip09g02093 493 Gene3D - 349 387 - -
Aip09g02093 493 Pfam Serine carboxypeptidase 41 490 IPR001563 GO:0004185|GO:0006508
Aip09g02093 493 SUPERFAMILY alpha/beta-Hydrolases 37 491 IPR029058 -
Aip09g02093 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 460 477 IPR033124 GO:0004185
Aip09g02093 493 Gene3D - 395 490 - -
Aip09g02093 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Aip09g02093 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Aip09g02093 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
Aip09g02093 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Aip09g02093 493 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Aip09g02093 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 492 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02093 Aip-Chr9 88626304 88647407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02093 332 493 Calmodulin-binding Proteins AT2G22960 46.914 8.28e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02093 K16296 - gmx:100790895 763.066