Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02080 ATGTTCAAATTTTTGAAAGAGGTAGTGGGTGGATCTGGGACAGGGTTGAAGGATCTGCCTTACAACATCGGCGAGGCTTACCCTTCCGCTTGGGGCTCTTGGGTTCATCACCGCGGCACCAACAAGGATGACGGGTCTCCGGTATCAATCTTCTCTCTGACTGGGAGCACCGCCCAGGATGGGCATTTAGCGGCGGGTCGAAATGGTGTCAAGCGACTCCGAACTGTTAGGCATCCGAATATCTTGTCATTTCTTCATAGTACCGAAGTCGAAACCTATGATGGCGGTTCTCCCAAGGTTACCATCTACATTGTGACTGAACCTGTGATGCCACTTACGGACAAGATTAGGGAGCTAGGCCTTGAAGGTACACAAAGGGATGAGTACTATGCTTGGGGTTTGCACCAAGTAGCTAAAGCTGTGAGCTTCTTAAATAACGATTGTAAACTTGTTCATGGTAATGTTTGCATGGCTAGTGTTGTCGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCGGAGTTTGATGGGAATAATGAAACTTCATCTACCTCAATGCTGCAATATGCATGGCTTGTTGGGGCACAATACAAACCAATGGAGCTGGTAAAATCGGACTGGGCTGCAATTAAGAAGTCTCCTCCGTGGTCCATTGATTCCTGGGGCATGGGTTGTCTAATCTATGAGATATTCTCTGGCACGAGATTGGGAAAAACAGAGGAGTTGCGCAACACAGGCTCCATTCCAAAGTCTCTGCTTCCAGATTACCAGCGACTACTGAGTTCCATGCCTTCTCGTAGATTAAATACTTCAAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTTGATACAATACATTTCATGGAAATTCTGAGTTTGAAAGATAGTGTTGAGAAAGACACCTTCTTCCGCAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTCCAATTGTATTGAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCACTTTTGAAAATGGGTTCCTGGCTTTCTGCTGAGGAGTTTCGTGTCAAGGTGCTTCCAACAATTGTTAAACTATATGCCTCTAATGACCGATCTATTAGAGTTGCCCTACTTCAACATATTGATCAATATGGAGAGTCATTAACAGCACAAATTGTTGATGAGCAGGTTTACCCTCATGTTGCTACTGGGTTCTCTGATACATCTGCTTTTTTAAGGGAGCTGACTCTCAAATCCATGCTAACTCTGGCTCCAAAGCTGTCTCAAAGGACAATTTCAGGGTCGTTATTAAAGTATCTGTCAAAGTTACAGGTTGATGAAGAACCAGCTATACGAACAAATACCACCATCTTGTTGGGAAATATTGCAACCTACTTAAATGATGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACTGCTCGTGCTTTGCGTGATACTTTTCCTCCTGCTAGAGCAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCTACTATGACATTACTGAAGTTGCAACGCGTATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGAGCTAAGGCATTTCAAGCTGTTGATCAATTTTTACAGATAGCGAAGAATTATTATCAGAAGACAAATGTAGCAGAGGGTGCTGCAGCTGCAGGCATGGGAAGCTCGTCTGTTCCAGAAAATGCTGGCTTACTTGGATGGGCTATGAGCTCGTTGACCCTGAAGGGTAAACCTTCTGATCATCATGCTCCAGTTGCTTCAGCAACTACTAGCACACGTACACAAACAACTTCTAGTGCCAGCTCAGCTGTAGAAACACCATCAACAGTACCTGTTCGAGTAAGCTCCTCAACTGATTTTGCTGAACAGCCTGCTCCTCCATCCCCTACATCAACGGATGGTTGGGGGGAACTAGAGAACGGAATTGATGAAGAGCATGAAGATGACAAAGATGGGTGGGGTGATCTGGAACCACTAGAAGAATCGAAGCCAGCTCCGGCTCTTGCAAACATTCAAGCAGCTCAACGGCGGCCAGTTACTCAACCTGTTGCACAGACAAAACTAGCCTCAAATTCGAGAAGCAAAAGTACACCGAAGTTGAACGAAGATGATGAATTGTGGGGTTCCATAGCAGCTCCTGCTCCGAAAACATCAAAACCTTTAAATTTGAAACCAAATGCAACTGATGATGATGACCCCTGGGCCGCTATTGCTGCTCCTGCACCCACCACTAAGGTCAAACCCTTGGCAGCAGGCCGAGGCCGGGGAGCCAAACCAGCTGCTCTAAAATTAGGTGCTCAGAGGATAAACCGAACATCATCATCTGGGATGTAA 2388 0.4493 MFKFLKEVVGGSGTGLKDLPYNIGEAYPSAWGSWVHHRGTNKDDGSPVSIFSLTGSTAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEVETYDGGSPKVTIYIVTEPVMPLTDKIRELGLEGTQRDEYYAWGLHQVAKAVSFLNNDCKLVHGNVCMASVVVTQTLDWKLHAFDVLSEFDGNNETSSTSMLQYAWLVGAQYKPMELVKSDWAAIKKSPPWSIDSWGMGCLIYEIFSGTRLGKTEELRNTGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRPIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKVLPTIVKLYASNDRSIRVALLQHIDQYGESLTAQIVDEQVYPHVATGFSDTSAFLRELTLKSMLTLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIATYLNDGTRKRVLINAFTARALRDTFPPARAAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRAKAFQAVDQFLQIAKNYYQKTNVAEGAAAAGMGSSSVPENAGLLGWAMSSLTLKGKPSDHHAPVASATTSTRTQTTSSASSAVETPSTVPVRVSSSTDFAEQPAPPSPTSTDGWGELENGIDEEHEDDKDGWGDLEPLEESKPAPALANIQAAQRRPVTQPVAQTKLASNSRSKSTPKLNEDDELWGSIAAPAPKTSKPLNLKPNATDDDDPWAAIAAPAPTTKVKPLAAGRGRGAKPAALKLGAQRINRTSSSGM 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02080 795 SUPERFAMILY ARM repeat 293 554 IPR016024 -
Aip09g02080 795 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Aip09g02080 795 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02080 795 MobiDBLite consensus disorder prediction 594 678 - -
Aip09g02080 795 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02080 795 Gene3D Transferase(Phosphotransferase) domain 1 112 280 - -
Aip09g02080 795 PANTHER - 1 792 - -
Aip09g02080 795 SUPERFAMILY Protein kinase-like (PK-like) 36 287 IPR011009 -
Aip09g02080 795 MobiDBLite consensus disorder prediction 691 777 - -
Aip09g02080 795 Pfam Protein kinase domain 41 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02080 795 Gene3D - 282 560 IPR011989 -
Aip09g02080 795 MobiDBLite consensus disorder prediction 602 653 - -
Aip09g02080 795 MobiDBLite consensus disorder prediction 692 714 - -
Aip09g02080 795 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Aip09g02080 795 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 792 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02080 70 291 MAP Kinase Kinase Kinase AT5G66850 25.523 9.85e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Aip09g02080 Pkinase 9.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02080 K08876 - gmx:100782748 1303.89