Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02048 ATGGAGAATAATTCACGTGCTTTGTTTTTGATGCTGATATTTACTCTTTCAACTGTTGTGTTATATTGTCCTTCAGAAGGACTCAATGCAGAGGGTGAATACCTTCTTGAAATGAAAAGGAAATTTTCCGACAAATACAGGCACCTGGAGAATTGGAACTCAAGTGATTCCACGCCTTGTGGGTGGAAGGGTGTGAACTGCAGCATGGTAAGCAATCCAGTGGTGGTGTCTCTTGACTTGCATTCGATGAACCTCTCCGGATCCTTGGCTCCCAGCATTGGTAGTTTGGTTTACTTGTCTCACCTTAACCTCTCTGGAAATTCCTTGACTGGGATTATACCCAAACAAATTGGAAACTGCTCAAGCTTGCAAGTTCTTGCTCTCAACAACAATCTTTTAGAAGGCCGAATTCCTGTTGAAATCGGCCAGCTTTTGGATTTAACAGAATTGTATGTTCACAACAACAGACTGTCTGGGCATTTTCCAGTGGAAATTGGTAACCTTTCTTCACTCACAGTATTTACTGCATACACCAATAATCTCACTGGATCTTTGCCAAGTTCTTTCGGCAACCTTAAGAGCTTGCGACGCTTCCGAACCGGTCAAAACATGATATCAGGAAGTCTACCCCAAGAGATAGGTGGATGTCAGAGCTTGGAGTATCTTGGTTTAACTCAGAATCAGATAAGTGGTGAAATTCCAAAAGCACTTGGGCTGCTCAAGAACATAAAATTTTTGGTCCTTAGGGAAAACAACTTCAATGGGGCCATACCCAAGGAGCTTGGAAACTGCACAAATTTGGAGGTTCTGGCTCTATATAGGAACATGCTTGTGGGATCAATCCCCAGGGAGCTGGGAAACCTTGTGCTCCTAAAGAAGTTGTACCTTTACCACAATGAGTTGACAGGAGAAATTCCAAGAGAAATTGGGAACCTTACTCTTGCTACTGAGATTGACTTTTCAGAGAACATGTTGACCGGAAGAATACCAGCAGAGTTGGCTAAGATTCCAGGGCTACAATTGCTTCATCTCTTCCAGAATGTGCTAACCGGTGTCATCCCAAATGAGCTCACAACTTTGAAGAACCTGACTGATGTTGATCTCTCTATCAATTATCTCAGAGGTACTATTCCTATTGGATTTCAGGACTTGCTCAACTTGACCACCTTGCAACTCTTCAACAACTCACTAAGTGGTTCTATTCCTCGAGCGCTCGGAGCCAACAGTCCACTCTGGGTGCTTGATGTATCATTCAACAACTTGGTGGGAAGAATTCCAGTTCATCTATGCCAAAATTCTAAGTTGATGCTGTTGAACTTGGGTTCAAACAAGCTCAGTGGAAGTATCCCTTATGGGATTTCAAGATGCAAGTCTTTGGTGCAACTTCGTCTCTTTGCTAACAACTTTCGAGGCAGGTTTCCTTCCACTTTGTGCAGACTTGTTAATCTTTCTGCACTGGAATTGGATCAAAATGACTTCACTGGTCCTCTTCCTCCACAAATTGGTAACTGCATAAGCTTGCAGAGACTTCACCTTTCCAACAATCGTTTTTCGTCTGAGCTGCCAAAAGAAATCGGTAACCTATCGCAGTTAGTGACCTTTAATGTCTCAACAAATTATCTTTACGGTAGATTACCTTTGGAACTATTCAATTGCAAGAAGCTCCAACGGCTTGATCTAAACCATAACAAATTTGTAGGTCCTTTTCCAGGTGAGATAGGAACTCTTTCTCAGTTGGAGCTTCTGAGGTTCACAGGAAATAACTTTTCAGGGCAAATTCCAGCGTCAATAGGGAAACTTGTGCGTTTGACTGAATTGCAAATGAGTGAAAACTCGTTCAGTGGTTGCATACCGGCCGAGTTGGGTGCCCTCTCGGCCTTACAGATCACATTGAATCTCAGTCATAATGAACTCACAGGCCAAATCCCCTTTGAGCTTGGGAAACTTAACATGCTAGAATCCCTCCAACTCAACAACAACCATTTGAGTGGTCAAATTCCATCCACCTTTGTGCAACTATCAAGTTTGTTGGCCTGCAACTTCTCAAACAATGATCTTTCTGGGCCTTTACCTTCCTTACCCTTCTTCCAGAACTCCACATCCAGCTGCTTCTTTGGAAATAAAGGACTATGCGGTGGAATTCTTCGCCCTTGCCCGAAAAATGCTTCGCCCTCTCCAAATAAACTAGGGAAGGTACTGGCTATAGCTGCAGCTGTCGTTAGTGCTGTTTCTTTAGTTCTGATTGTGGTAATTATATATCTCATGATACGTCCGGTGGATTCCGTTTCGCCACAGCTAGACGTCGACACATCACATGCTCCACCTGTTTCAGACATGTACTTCTTCCCAAAGGAGTTCTTAACATTCCAAGACGTGGTTGAAGCCACTGAAAATTTCCACTCCAAGTATATCATTGGGAAAGGTGGCACTGGTACTGTGTACAGAGCAGATATATCAACCAGTGACACAATTGCTATTAAGAAGCTAGATTCGAGTCGGGAAGGCGTGGTCTTAAATGACAGCTTCCGCGCTGAAATTTCTACCTTGGGAAAAATACGTCACAGAAATATTGTGAAATTGCATGCCTTCTGCACCTATCGTGGCTCAAAACTAATACTTTACGAGTACATGGCTAAGGGTAGCTTGGGGGAGTTATTGCAAGGAGCAACTTGTAGTCTTGATTGGCATAAAAGATTTAGGATTGCCCTTGGAACTGCACAAGGACTATCTTATTTGCACCATGATTGCAAGCCTAGGATAATCCACCGTGACATTAAGCCTAGTAACATACTCATTGATCATGAATTTGAAGCTCATGTTGGTGACTTTGGCTTGGCAAAGCTGATTGATGTGTCAACGTCTAAATCAGTGTCTGCAGTTGCAGGTTCTTATGGCTACATTGCCCCGGAGTATGCATATACCGTGAAAGTGACTGAAAAATGTGACGTATATAGCTATGGTGTTGTCCTTTTGGAGCTACTGACTGGCAAGAAGGCAGTGCAACCAATAGATCAAGGTGGTGATCTCGTGTCATGGGTGAAAAATCATATACACAAACATTCTTTATCACTGGACATTTTTGATACTCGATTGAACCTGCATCTATTGGATAAAATACTTGTTGCTCAGATATGTGATGTCTTGAAAATTGCTGTGATCTGCACTGATACGTGTGCTTCAAGGCGCCCGAGTATGCGCAAAGTTGTGTCAATGCTTGTAAGTTCTAGTAATCGAGTAGAGCAACCATCTTCGTTGTCTTCTCCATGTGAAGAATCAAGATGCTAA 3285 0.4283 MENNSRALFLMLIFTLSTVVLYCPSEGLNAEGEYLLEMKRKFSDKYRHLENWNSSDSTPCGWKGVNCSMVSNPVVVSLDLHSMNLSGSLAPSIGSLVYLSHLNLSGNSLTGIIPKQIGNCSSLQVLALNNNLLEGRIPVEIGQLLDLTELYVHNNRLSGHFPVEIGNLSSLTVFTAYTNNLTGSLPSSFGNLKSLRRFRTGQNMISGSLPQEIGGCQSLEYLGLTQNQISGEIPKALGLLKNIKFLVLRENNFNGAIPKELGNCTNLEVLALYRNMLVGSIPRELGNLVLLKKLYLYHNELTGEIPREIGNLTLATEIDFSENMLTGRIPAELAKIPGLQLLHLFQNVLTGVIPNELTTLKNLTDVDLSINYLRGTIPIGFQDLLNLTTLQLFNNSLSGSIPRALGANSPLWVLDVSFNNLVGRIPVHLCQNSKLMLLNLGSNKLSGSIPYGISRCKSLVQLRLFANNFRGRFPSTLCRLVNLSALELDQNDFTGPLPPQIGNCISLQRLHLSNNRFSSELPKEIGNLSQLVTFNVSTNYLYGRLPLELFNCKKLQRLDLNHNKFVGPFPGEIGTLSQLELLRFTGNNFSGQIPASIGKLVRLTELQMSENSFSGCIPAELGALSALQITLNLSHNELTGQIPFELGKLNMLESLQLNNNHLSGQIPSTFVQLSSLLACNFSNNDLSGPLPSLPFFQNSTSSCFFGNKGLCGGILRPCPKNASPSPNKLGKVLAIAAAVVSAVSLVLIVVIIYLMIRPVDSVSPQLDVDTSHAPPVSDMYFFPKEFLTFQDVVEATENFHSKYIIGKGGTGTVYRADISTSDTIAIKKLDSSREGVVLNDSFRAEISTLGKIRHRNIVKLHAFCTYRGSKLILYEYMAKGSLGELLQGATCSLDWHKRFRIALGTAQGLSYLHHDCKPRIIHRDIKPSNILIDHEFEAHVGDFGLAKLIDVSTSKSVSAVAGSYGYIAPEYAYTVKVTEKCDVYSYGVVLLELLTGKKAVQPIDQGGDLVSWVKNHIHKHSLSLDIFDTRLNLHLLDKILVAQICDVLKIAVICTDTCASRRPSMRKVVSMLVSSSNRVEQPSSLSSPCEESRC 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02048 1094 Gene3D Phosphorylase Kinase; domain 1 770 876 - -
Aip09g02048 1094 Gene3D Ribonuclease Inhibitor 27 179 IPR032675 -
Aip09g02048 1094 SMART serkin_6 799 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02048 1094 SUPERFAMILY L domain-like 379 719 - -
Aip09g02048 1094 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 1083 - -
Aip09g02048 1094 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Aip09g02048 1094 Pfam Protein kinase domain 800 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02048 1094 ProSitePatterns Protein kinases ATP-binding region signature. 805 828 IPR017441 GO:0005524
Aip09g02048 1094 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Aip09g02048 1094 SUPERFAMILY RNI-like 77 430 - -
Aip09g02048 1094 Gene3D Transferase(Phosphotransferase) domain 1 877 1087 - -
Aip09g02048 1094 ProSiteProfiles Protein kinase domain profile. 799 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02048 1094 PANTHER LRR RECEPTOR-LIKE KINASE 9 1083 - -
Aip09g02048 1094 SMART LRR_typ_2 240 264 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 96 120 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 144 168 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 480 504 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 649 673 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 600 624 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 288 312 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 505 528 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 384 408 IPR003591 -
Aip09g02048 1094 SMART LRR_typ_2 192 216 IPR003591 -
Aip09g02048 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 920 932 IPR008271 GO:0004672|GO:0006468
Aip09g02048 1094 Gene3D Ribonuclease Inhibitor 180 281 IPR032675 -
Aip09g02048 1094 Gene3D Ribonuclease Inhibitor 282 380 IPR032675 -
Aip09g02048 1094 SUPERFAMILY Protein kinase-like (PK-like) 774 1072 IPR011009 -
Aip09g02048 1094 Gene3D Ribonuclease Inhibitor 381 722 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02048 Aip-Chr9 80582033 80585861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02048 53 1072 Receptor kinase-like Gene Family AT1G73080 38.382 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip09g02048 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02048 - - adu:107465566 2069.28