Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02023 TCTCTCTCTCTCTCTCTCTCTTCGATCATATCTCTCTCTTCGATCATGAATAATATCCCCAGAACCAATAAGCTATTCCCATTCTTGTGCCTTGTTTGTATAACGGTATTGTTGAATGCAATTCGTGGTTCATCAAAACCAAACAAGGCAGAGTCACTGATCTTGGGATGCGGCTTGGAAGAAGGCGGTGGCAAAGATGCAGACGGAAGACAATGGGAACCAGACAACAAGTACGTATCAGGGGACAAATCGGTCATTTCAAAAGCTTCCTTCCAAGACCCTTCGCTTCTCTCCGTGGTTCCTTACATGACAGCAAGAATCTTCCCATCAGAAGCCACCTACAAATTCTCCGTTCAACCGGACAAGCGTTACTGGCTCAGGCTCCATTTCTACCCCGCTCTTTACTCTAATTTCGACCCTTCCAATTCATATTTCTCCGTAACCGCCAACGGCGTTGTTCTTTTAACAAATTTCAGTGCATCAATCACGTGTCAGGCTCTCAGTCAGGCCTACATTGACAGAGAGTATTCATTGGCACCTCTCAATTCCGACTCCCTCACTCTCACCTTCAAGCCATCGGAGAATCACAACGGCGCTTTCGCCTTCGTCAACGGCATTCAACTAATCCAGATGCCCGACTTGTTTGATACAGCTGCAATGGTAGGCTTTGCTGAACAATCAGTCGATTTAAAAGCTATGCATTCTCAGACCATGTTTAGATTAAACGTCGGCGGGCAATTCATATCGGCAACGCAAGATTCCGGTCTAAGCCGGATGTGGTACGACGACACACCATATCTCTTCGGAGCGGCAACCGGCGTCACGACCCAAGCTGCCAAAGATGTCATGATCAATTACCAATCCATGCCGCAATACGTAGCTCCTCCTAGTGTTTACTCTACGTCAAGATCCATGGGGGAGGATAAGGATGTCAACCTTCACTACAATCTCACATGGGTTTTTAGCGTGGATCCTAATTCCATGTACCTTATTAGGTTGCATTTTTGTGATTACTACTATTCCAAAGTGAATGAGCTCGTCTTCCAGATCTTTCTCAACAACCAAACGGTTACAAATGTATTTGATGTGATTGCGGTGTCAGGTGGAAAAGGGGTTCCAACGTATAAAGACTTCGTGGTGTATACCCAAGGAAATGAAGGCTTTAGCAATAACCTTTGGCTTGCACTTCACCCTTCGGTTGAGCAAAAACCTTCGTATTACGATGCATTGCTTAACGGGGTTGAGATTTTCAAGGTCAATGACACAGACTTGTCCGGTCCTAATCCTCTGCCTTCCGCAATGCTGGAAGAGCACGAGGAAAAGGAAAGGAGCTTTGCAGAAGACGACGACGGCATTTCCGCTGCCATTAAAAAGCACATCGTCATAGGTGGAGCTGCAGGGGGTGCTGGTTTCGCCGTGGTCGCTGCAATTCTTATAGTTGCTCATAGGAACAAAAAGAAGGCTCCAGCTTCTTACTCCAACACTTCAAGTTGGTTGCCCGTTTATGCGAACACGCACACCAATGGGACCAAATCCACGGTGTCAGGGAAGAGTAACGGCGGTGGTAGCAACCACTTGTCAGCCATGACTCAGGGACTCTGCCGGTACTTCTCGTTACAAGAGATGAAGCAGGCAACGAAAAATTTCGACGAGTCGAATGTTATTGGCGTTGGAGGGTTTGGCAAAGTTTACAAGGGCGTCATCGACAATGGCTTCAAAGTAGCAATCAAGAGATCAAACCCGCAATCAGAACAAGGAGTGAATGAATTTCAAACAGAGATAGAAATGCTTTCCAAGTTAAGGCACAAGCATTTGGTTTCGTTGATCGGATTCTGTGAAGAAGGTGATGAGATGTGCCTTGTTTATGACTACATGGCTCTTGGCACCTTAAGGGAACATCTTTACAAGGGAAACAAACCATTGGAGACTCTAACATGGAAGCAAAGGTTGGAAATATGCATTGGAGCCGCAAGAGGGCTTCATTACCTTCACACTGGGGCCAAATACACAATCATCCATAGAGATGTAAAAACAACTAACATCCTTCTTGATGAGAATTGGGTTGCCAAGGTCTCGGATTTCGGTTTGTCAAAAACCGGTCCAAACATGAATCAAGGCCATGTTACCACCGTGGTGAAGGGTAGTTTTGGATATTTGGATCCAGAATACTTTAGGAGGCAACAGTTGACTGAAAAGTCTGACGTGTACTCGTTCGGGGTGGTTCTGTTCGAGGTGTTGTGTGCTCGGCCCGCATTGAATCCAAACCTTCCAAAAGATCAAGTTAGCCTTTCGGATTGGGCTCTTCAGTGCAAGAGAAAAGGAACATTGGAGAACATCATTGATCCTTGTCTGAAAGGGAAGATCAACCCGGAGAGCTTGAACAAGTTCGCCGATACTGCCGAGAAGTGTTTGTCCGATTGTGGACTCGATCGTCCCTCCATGAATGACTTGTTGTGGAACCTTGAATTTGCTCTCAACTTGCAAGAGAATCCTGATGCTTCACATGATGAAATTCATCAGTTTGAAGAAGTGAACTTGAATGACAATAATGACATGGCGGCACATGCTACGTAA 2574 0.458 SLSLSLSSIISLSSIMNNIPRTNKLFPFLCLVCITVLLNAIRGSSKPNKAESLILGCGLEEGGGKDADGRQWEPDNKYVSGDKSVISKASFQDPSLLSVVPYMTARIFPSEATYKFSVQPDKRYWLRLHFYPALYSNFDPSNSYFSVTANGVVLLTNFSASITCQALSQAYIDREYSLAPLNSDSLTLTFKPSENHNGAFAFVNGIQLIQMPDLFDTAAMVGFAEQSVDLKAMHSQTMFRLNVGGQFISATQDSGLSRMWYDDTPYLFGAATGVTTQAAKDVMINYQSMPQYVAPPSVYSTSRSMGEDKDVNLHYNLTWVFSVDPNSMYLIRLHFCDYYYSKVNELVFQIFLNNQTVTNVFDVIAVSGGKGVPTYKDFVVYTQGNEGFSNNLWLALHPSVEQKPSYYDALLNGVEIFKVNDTDLSGPNPLPSAMLEEHEEKERSFAEDDDGISAAIKKHIVIGGAAGGAGFAVVAAILIVAHRNKKKAPASYSNTSSWLPVYANTHTNGTKSTVSGKSNGGGSNHLSAMTQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEGDEMCLVYDYMALGTLREHLYKGNKPLETLTWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNQGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPNLPKDQVSLSDWALQCKRKGTLENIIDPCLKGKINPESLNKFADTAEKCLSDCGLDRPSMNDLLWNLEFALNLQENPDASHDEIHQFEEVNLNDNNDMAAHAT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02023 857 SUPERFAMILY Protein kinase-like (PK-like) 525 824 IPR011009 -
Aip09g02023 857 Gene3D Transferase(Phosphotransferase) domain 1 625 849 - -
Aip09g02023 857 PANTHER OS07G0166700 PROTEIN 44 855 IPR045272 GO:0004714|GO:0006468
Aip09g02023 857 ProSitePatterns Protein kinases ATP-binding region signature. 555 577 IPR017441 GO:0005524
Aip09g02023 857 Pfam Protein tyrosine and serine/threonine kinase 553 750 IPR001245 GO:0004672|GO:0006468
Aip09g02023 857 ProSiteProfiles Protein kinase domain profile. 549 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02023 857 CDD STKc_IRAK 555 822 - -
Aip09g02023 857 Pfam Malectin-like domain 56 419 IPR024788 -
Aip09g02023 857 SMART serkin_6 549 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02023 857 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 44 855 - -
Aip09g02023 857 Gene3D Phosphorylase Kinase; domain 1 511 624 - -
Aip09g02023 857 Gene3D - 56 212 - -
Aip09g02023 857 Gene3D - 233 421 - -
Aip09g02023 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 671 683 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02023 Aip-Chr9 76859146 76861770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02023 51 854 Receptor kinase-like Gene Family AT3G51550 52.927 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip09g02023 Malectin_like 4.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02023 - - gmx:100815737 1258.82