Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip09g02018 | ATGGTGACGAACACCAACAAGGTCGTGAAAGTGAAGAGAGACACGCTAAGAGCATGCATGACATGCCCTCTTTGCAATAACCTCCTCAAAGATGCCACCACTATCTCTCTCTGCCTGCACACATTTTGTAGGAAGTGTATATATGAGAAGCTCTCGGATGAGGAGGTGGATTGCTGTCCTGTGTGCAACATTGATCTAGGCTGCCTTCCGGTGGAAAAACTCAGGGCAGACCATAATTTACAAGACATAAGGGCTAAAATATTTCCTTATAAGAAAAGGAAGACCAAGATCAAGGAACCAGAAGTTTTGCCTTCAGTATCCCCACCTGCAAAGAGGAAGGAAAGATCACTTTCATCGTTGGTAGCTCCGAAAGTTTCGGCACAAACAGGCCTTACAGGAAAGAGGACAAAAACTGTGTCAAGAAAGGCTGCTGCATTACGTGGGTGCAGTTTTATTCTTGAAGAATCCATAAAAAAGGAAGAAACAAATGGTGGAGATAACATGGATTTGTCAACGCCCGAGCCTTCTAAGAAGAACAAGTCCAGCGAAAGCACGGAGAACAGTGTAGAACTTACAGAAGGTAAGGCTGATCTCTGGACACCGTTAAACTGCCTTGTCGAAGCCGCCAACAGAACAAAGTCCTCCAGGTCAAATTCACAAGCAGTTCCCCCTGCCAAATCGGACTCTCCAACTACTGCACATGATGCACGAGATATGTCTGAAATCACAAACAAAGCCGAGCTACCTGCTTCAGGTCAGAATGAAATAAGCATTCCAAAATCTAAGAGTAAGGATAATGGACACAAAGCAAAATTTGGTGATGGCAAGGATGGCAACAGCGTGCCTTCGGGACCAGTGAAGCGAAGAAGGTTGCGGCCTTCTGGTCAGAAAAAGGTTGCGCCGACTGAGGGGTCTACCTCAGCCCAAGTCATGCTAGATGCAACAAGGGGATACTGCAACAGAAAGAACACCCCTATTTGGTTTTCATTAGTTGCTTCAGAGGACCAGAAAGGAGATGTTCCGTTGCCACAGGTCTCAGCATGTTACTTAAGAATAAAGGATGGCACTGTGCCTGTTTCGTTTATTCAAAAGTACCTTGTGAAGAAACTTAATCTTGCCAGTGAAGCAGAGGTAGAAATAATGTGCCGGGGTCAACCAGTGCTGCCATCTCTGCAACTACACAACCTTGTAGATTTGTGGTTCAGAACAGCATCAACGTCAAAAAAGATACCAGCATCTGTAGGATCATCAGCCAAGGATTTTGTTATGGTTTTATCATATTGTCGAAAGGCCTTGCCACCTTGA | 1305 | 0.4513 | MVTNTNKVVKVKRDTLRACMTCPLCNNLLKDATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLGCLPVEKLRADHNLQDIRAKIFPYKKRKTKIKEPEVLPSVSPPAKRKERSLSSLVAPKVSAQTGLTGKRTKTVSRKAAALRGCSFILEESIKKEETNGGDNMDLSTPEPSKKNKSSESTENSVELTEGKADLWTPLNCLVEAANRTKSSRSNSQAVPPAKSDSPTTAHDARDMSEITNKAELPASGQNEISIPKSKSKDNGHKAKFGDGKDGNSVPSGPVKRRRLRPSGQKKVAPTEGSTSAQVMLDATRGYCNRKNTPIWFSLVASEDQKGDVPLPQVSACYLRIKDGTVPVSFIQKYLVKKLNLASEAEVEIMCRGQPVLPSLQLHNLVDLWFRTASTSKKIPASVGSSAKDFVMVLSYCRKALPP | 434 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip09g02018 | 434 | Gene3D | - | 307 | 410 | - | - | |
Aip09g02018 | 434 | ProSiteProfiles | Zinc finger RING-type profile. | 22 | 63 | IPR001841 | - | |
Aip09g02018 | 434 | MobiDBLite | consensus disorder prediction | 246 | 260 | - | - | |
Aip09g02018 | 434 | PANTHER | UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED | 6 | 432 | - | - | |
Aip09g02018 | 434 | SUPERFAMILY | RING/U-box | 16 | 81 | - | - | |
Aip09g02018 | 434 | SMART | ring_2 | 22 | 62 | IPR001841 | - | |
Aip09g02018 | 434 | MobiDBLite | consensus disorder prediction | 160 | 194 | - | - | |
Aip09g02018 | 434 | Pfam | Zinc finger, C3HC4 type (RING finger) | 22 | 62 | - | - | |
Aip09g02018 | 434 | ProSitePatterns | Zinc finger RING-type signature. | 38 | 47 | IPR017907 | - | |
Aip09g02018 | 434 | MobiDBLite | consensus disorder prediction | 210 | 306 | - | - | |
Aip09g02018 | 434 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 6 | 432 | IPR044807 | GO:0004842 | |
Aip09g02018 | 434 | MobiDBLite | consensus disorder prediction | 261 | 275 | - | - | |
Aip09g02018 | 434 | MobiDBLite | consensus disorder prediction | 210 | 227 | - | - | |
Aip09g02018 | 434 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 5 | 108 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip09g02018 | Aip-Chr9 | 76117060 | 76122325 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip09g02018 | 8 | 353 | C3H Transcription Factor Family | AT2G30580 | 43.014 | 3.81e-80 | 249 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip09g02018 | K16277 | - | gmx:100783999 | 674.855 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip06g01065 | 06 | 15620811 | 15624054 | Aip09g02018 | 09 | 76117060 | 76122325 | ECH | |
Aip09g02018 | 09 | 76117060 | 76122325 | Aip09g02018 | 09 | 76117060 | 76122325 | ECH |