Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02015 ATGCGGGGCTGGAAAACCACACTAATGGATGTCTTGGCTGGAAGAAAAACTGGAGGTGTTGTGAAGGTTCTTCTACAGTTAGATCCGTTTCTCAATGAACTCACCATCATGTTTGAGCGCAGCACCGAGACGGGCTCTGTGGGTTACACTTCAACGATGTGTTTCATTATGCCTCCTTTTCATGTTCTTGGTGTGCCTTTAGCATCCTTGAAGTCTAAAGCTGTGAGGAATAAAATGGCCGCAGCTAGTGAAGTGATTGACTATAAATGCCTTACTTGTTTTACCAATGGGAAGCATACAATTTCTACATCAAAGGATCTTCTTGCCAGAGGGTCTAATCTCTTGGACCGATCCGAGATCCCACCATACTTGAATGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCTCAGCAAGATGCCAGAGGACTTTGCCAAGATTCTGGCTGAAGTTGAAAACCTTGCTGCTAATTGTAATGAGATTGACCTTAAGGAATTCAGTGTAGTACCACTAACGTTTAGCTCAAGGAATTATCTTTTGTAG 549 0.4353 MRGWKTTLMDVLAGRKTGGVVKVLLQLDPFLNELTIMFERSTETGSVGYTSTMCFIMPPFHVLGVPLASLKSKAVRNKMAAASEVIDYKCLTCFTNGKHTISTSKDLLARGSNLLDRSEIPPYLNGEVPGDYGYDPFGLSKMPEDFAKILAEVENLAANCNEIDLKEFSVVPLTFSSRNYLL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02015 182 Gene3D Chlorophyll a/b binding protein domain 113 156 - -
Aip09g02015 182 Gene3D Signal recognition particle alu RNA binding heterodimer, srp9/1 23 112 IPR009018 GO:0006614|GO:0008312|GO:0048500
Aip09g02015 182 PANTHER - 14 104 - -
Aip09g02015 182 SUPERFAMILY Chlorophyll a-b binding protein 119 148 - -
Aip09g02015 182 Pfam Chlorophyll A-B binding protein 121 148 IPR022796 -
Aip09g02015 182 PANTHER SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN 14 104 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02015 Aip-Chr9 75163428 75166801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02015 114 151 Chloroplast and Mitochondria Gene Families AT4G10340 81.579 2.32e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02015 - - jre:108982787 81.6481