Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02010 ATGGTTGGTGAAGGTAGCTTTGGCTGTGTATTTAAGGGCTGGATCGACGAGCACACTCTTGAACCCATAAAACCGGGCACCAGACTCATCATTGTGATAGAAATCAACTACTTGGGTCAGCTGGATCATCCTAATCTTGTGAAACTCATAGGTTACAGCTTAGAAGATGATCACCGGATTTTGGTGTATGAGTTTTTGACTATAGGCAGTTTGGATAACCATTTGTTTAGGAGAGCTTCTTATGTTCGCCCGCTTTCTTGGAACATACGCATGAATATTGCTCTTGATGCAGCTAAAGGCCTTGCATTTATTCACAGCGACCAAGTAGATGTAATATACCGAGACTTGAAGACTTCTAACATCTTTCTTGATTCGGTAGGCAAATCAAATTCACCTTACGAGTATTTCACACTTCATTTCTGA 423 0.4113 MVGEGSFGCVFKGWIDEHTLEPIKPGTRLIIVIEINYLGQLDHPNLVKLIGYSLEDDHRILVYEFLTIGSLDNHLFRRASYVRPLSWNIRMNIALDAAKGLAFIHSDQVDVIYRDLKTSNIFLDSVGKSNSPYEYFTLHF 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02010 140 SUPERFAMILY Protein kinase-like (PK-like) 2 125 IPR011009 -
Aip09g02010 140 Gene3D Phosphorylase Kinase; domain 1 1 65 - -
Aip09g02010 140 Gene3D Transferase(Phosphotransferase) domain 1 67 131 - -
Aip09g02010 140 PANTHER OS01G0588500 PROTEIN-RELATED 2 125 - -
Aip09g02010 140 Pfam Protein kinase domain 2 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02010 140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 111 123 IPR008271 GO:0004672|GO:0006468
Aip09g02010 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g02010 140 PANTHER KINASE 1B 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02010 Aip-Chr9 74654315 74654894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02010 1 125 Receptor kinase-like Gene Family AT5G56890 42.105 8.26e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip09g02010 Pkinase 6.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02010 - - ahf:112778450 215.312