Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02005 ATGTTTGATGGAGTGCCAGGAGACCAGTTCCATCAATTCATAACACCAACAAGAACAACAACAACAACAACCTCATCACAAATCCCTCTTCATCATCACTTACCTTTTCCTCTCCCTCTCCATCATCCTTCTNCTACTCCTTTTGATCCTTATCATCATCATCACCACCAATTGCAGCTTCACCAAGTTCATCATCAACAACACCCCAGTATCTTGCACCCATCATTACACCTTCACCAACACCACAACAACAATAACAAACATCATCATCATGATGAAGACCGGGAAGAAAACAACGCTAGCAGTACTTCCACTACTACTGTGCCAATGAATTTTGAAATTGAAAGAGATCATGAGAGGCAGCAAATGCCTCCTCCTCAGCTCATTGATCCTTGGAGTAATGATGAAGTACTTGCTCTCTTGAGGATCAGATCTACCATGGAGAGTTGGTTCCCACAACTCACTTGGGAACATGTCTCGAGGAAGATGGCAGAGCTTGGATATAAGAGAAGTGCTGAGAAGTGCAAAGAGAAGTTTGAAGAAGAAAGCAGATATTTCAGCAGCAACATTAACTTCACCAACAAAACCATTACTCCTCCTCCTACTACTACTACAGGTTACCGCTTTCTTAGTGAACTTGAAGAGCTTTATCATCAACAAGATAATAGTGATCATCATCATCAACAAGAAGTGGTGGTAGTGGAGAAGCAACCAAGTAGTACTGAGGGGCAAGAAGACAAGGTAGTCATGGACCAAGCATTGGGAGAAGATGATAAGGAGAATGATGAAGAGGTTGTTGCTGGGGCGGCCACGGTGGTGTTGCCGGAGAAGATTATTACGACAAAAACAAAGGAGAGGAAGAGGAAGAGGGGTGGTGGAGATGGTGACGGCAACGGCGACCGCGTGAGGTTTGAGATGTTCAAAGGTTTTTGTGAAAGCATTGTGCACAAGATGATGGAGCAACAAGAAGAGATGCACAACAAGTTAATAGAAGATATGGTGAGAAGAGATGAAGAGAAGCTTGCAAGAGAAGAGGCATGGAAGAAGCAAGAGGTGGAGAGAATGAACAAGGAGCTTGAGATCATGCAACAGGAACAAGCCATTGCTGGTGATAGACAAGCAAACATCATTGAGTTCTTGAAGAAATTTGCCCCAGAAATTCAAACCCTTGTTTGTGTTGAAGAAGATCATGATGATCACAATAATAATGGAAGAAACAAATTGGTGAAGGTAACAAATAGTAATAACAATGTGGAACACAATGGTTCAAATTTGTTGTTGCATTCCCAAAACCCTAATCCTCCATCATCACCTTCTTCTTCTTCTGCTGTGATTCTCAATAACCAAAATGGTGTTTTTGTTGCTGCTGCTTCTTCTTCAACAAACCCTAGCTCAAGTCCTATGATACAAGCTGGCAAGAACCCTAATAGTACTTATCTCAACAATGATAGCCCAATAGTAGAGGCGGACTCGGCGGCAAAGAAGGCAGCTGCCACTACCGCGAACTGCGAGAAAGATGAAATTGGAAGAAGATGGCCAAAAGATGAAGTGTTGGCACTGATAAACCTGAGGTGCAACACCCAAGTGAGCAGCAATAATGATGAAAATGGGAGAGAAACTCACAAGGCTCTTCCATTGTGGGAGAGAATCTCACAAGGGATGGTGGAATTGGGGTACACAAGGAGTGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGGAAAACCAAGGATGCTAACAAGAAGAGGTCCCTTGATTCAAGAACTTGTCCCTATTTTCATCTTCTCAGTAGCCTCTATAGCCAAGGGAAGCTTCTTCTCCAACCTGAGAAGCAAGAAACTACTACTAATAATAATGATAACCATGGAAAAAAAATTGTCACAGATCATCAAACTTCTTCACATCAAATGGGGTCTGCTATTGCTGCTGATGATAATCATGATCATGGAGGTGAGAATAACAATAATAACAAAGCTTTGATGCAAGCACCTTCTTTGGATTTTGATCAGTTTTAA 2028 0.4206 MFDGVPGDQFHQFITPTRTTTTTTSSQIPLHHHLPFPLPLHHPSXTPFDPYHHHHHQLQLHQVHHQQHPSILHPSLHLHQHHNNNNKHHHHDEDREENNASSTSTTTVPMNFEIERDHERQQMPPPQLIDPWSNDEVLALLRIRSTMESWFPQLTWEHVSRKMAELGYKRSAEKCKEKFEEESRYFSSNINFTNKTITPPPTTTTGYRFLSELEELYHQQDNSDHHHQQEVVVVEKQPSSTEGQEDKVVMDQALGEDDKENDEEVVAGAATVVLPEKIITTKTKERKRKRGGGDGDGNGDRVRFEMFKGFCESIVHKMMEQQEEMHNKLIEDMVRRDEEKLAREEAWKKQEVERMNKELEIMQQEQAIAGDRQANIIEFLKKFAPEIQTLVCVEEDHDDHNNNGRNKLVKVTNSNNNVEHNGSNLLLHSQNPNPPSSPSSSSAVILNNQNGVFVAAASSSTNPSSSPMIQAGKNPNSTYLNNDSPIVEADSAAKKAAATTANCEKDEIGRRWPKDEVLALINLRCNTQVSSNNDENGRETHKALPLWERISQGMVELGYTRSAKRCKEKWENINKYFRKTKDANKKRSLDSRTCPYFHLLSSLYSQGKLLLQPEKQETTTNNNDNHGKKIVTDHQTSSHQMGSAIAADDNHDHGGENNNNNKALMQAPSLDFDQF 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02005 675 ProSiteProfiles Myb-like domain profile. 511 574 IPR001005 -
Aip09g02005 675 PANTHER - 27 658 - -
Aip09g02005 675 MobiDBLite consensus disorder prediction 406 444 - -
Aip09g02005 675 ProSiteProfiles Myb-like domain profile. 131 183 IPR001005 -
Aip09g02005 675 MobiDBLite consensus disorder prediction 1 106 - -
Aip09g02005 675 MobiDBLite consensus disorder prediction 464 484 - -
Aip09g02005 675 MobiDBLite consensus disorder prediction 398 444 - -
Aip09g02005 675 CDD GT1 510 581 - -
Aip09g02005 675 MobiDBLite consensus disorder prediction 611 675 - -
Aip09g02005 675 MobiDBLite consensus disorder prediction 611 626 - -
Aip09g02005 675 Coils Coil 345 365 - -
Aip09g02005 675 Gene3D - 132 187 - -
Aip09g02005 675 Gene3D - 512 579 - -
Aip09g02005 675 SMART sant 508 576 IPR001005 -
Aip09g02005 675 SMART sant 128 185 IPR001005 -
Aip09g02005 675 MobiDBLite consensus disorder prediction 12 30 - -
Aip09g02005 675 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 27 658 - -
Aip09g02005 675 Pfam Myb/SANT-like DNA-binding domain 510 602 IPR044822 -
Aip09g02005 675 Pfam Myb/SANT-like DNA-binding domain 130 187 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02005 Aip-Chr9 72615707 72618660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g02005 131 606 Trihelix Transcription Factor Family AT5G28300 42.209 6.80e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip09g02005 Myb_DNA-bind_4 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02005 - - ahf:112775947 1093.95