Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01993 ATGATTGGAGGTTCATATGCATTCATGGTCCCCATCATGTCCATCATTCATGATCCATCTCTGGCAATGATACAAGACCCTGAATTGGTGATCATGTTCTTATCGAAGTCTGACGAAGAAATCAATGTAAATAGAAAACTAGCTAAGGAATTGGTTGACAAATGGAGCCGACCCATAATTAATAAGAGTACACGGTTTGAGGACATGAGAAATGCTGAGGATGACAGGATTCCTTTCAGGAGGCCAACTGTTAAAAAGCCGGCAAATAAAGCAGCAGGGATGGAATCCAGAGATGGTGATCTTGATTTGGAATTTTCACAGCCTAGGTCTGGACAGTCTTCTTCAAGGCAACATGCATCAAGGCCAGAAGCAACACCTTTGGATTTTGAGATCCGTCCCCAGTCTAAAATTGATGCAGAAGAAGTTAGAGCGTGA 435 0.4253 MIGGSYAFMVPIMSIIHDPSLAMIQDPELVIMFLSKSDEEINVNRKLAKELVDKWSRPIINKSTRFEDMRNAEDDRIPFRRPTVKKPANKAAGMESRDGDLDLEFSQPRSGQSSSRQHASRPEATPLDFEIRPQSKIDAEEVRA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01993 144 PANTHER PROTEIN IWS1 HOMOLOG 1 30 144 IPR044204 GO:0009742|GO:0032784
Aip09g01993 144 MobiDBLite consensus disorder prediction 70 144 - -
Aip09g01993 144 PANTHER PROTEIN IWS1 HOMOLOG 1 30 144 - -
Aip09g01993 144 MobiDBLite consensus disorder prediction 106 121 - -
Aip09g01993 144 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 27 65 IPR035441 -
Aip09g01993 144 Pfam TFIIS helical bundle-like domain 30 59 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01993 Aip-Chr9 69468450 69470733 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01993 1 35 Organic Solute Cotransporters AT2G34190 71.429 2.86e-09 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aip09g01993 Med26 2.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01993 K17498 - aip:107617058 217.624