Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01983 ATGGAGTCAGAGCGAGACAAATACAGCATGATAAATTTTGAGGAGACCGAGTTGCGACTCGGTTTGCCGGGTGGGTCGAACGATGGCGAGTCATCACTTAGGAGCACTTGTACTACAACTGGAAAGAGGGGTTTCTCGGAGACTACTCCGTCTACTGTGGATCTAAAGCTGAATCTGAATCTTTCTTCTTCTTCTTGTTCTTCTTCTCTTAACAATGAATCCGTTTCAGCTTCTTCTGTCAACGTTGACAAGAACAAAGAGAAGAATGGTGGTGCTGCTGCTCCTACTTCTACACCTCCTGTTACTCGTTCTACCGACCCGGCGAAACCACCTGCCAAGGCACAAGTAGTAGGTTGGCCTCCAGTTAGGTCCTTCAGGAAGAACATAGTAAGCGGGCAGAAGAGCAACAAGGAAGAAGTGGAAAAGCCCGCCACCACCACCGTAGGTCAAACTGCAACCGCGACCTCCGCGGCAACAAGCGGCAACGGAGGGGCGTACGTGAAGGTGAGCGTGGACGGAGCACCATACTTGAGGAAAGTGGACCTGAAGCAGTACAAGAGCTACAGAGAGCTGTCAGATGCGCTGGCAAAGATGTTCAGTGGCACCATGATAGAGCCAGCTGTCAGTGGGCCCCATCACGAGTTCAAAGGAAATGGCCTCTTCAGCTTCAATGGATCTGACTATGTCCCCACTTATGAAGACAAAGACGCTGATTGGATGCTCGTCGGTGACGTTCCCTGGGAAATGTTCGTAGAATCATGCAAGCGCCTTCGCATAGTGAAAGGTTCTGAGGCAACTGGGCTTGGAGTTCCAAGAGCAGCAGCGGAAGAGCAGTGCAAGATCAGAAGCTGA 852 0.5094 MESERDKYSMINFEETELRLGLPGGSNDGESSLRSTCTTTGKRGFSETTPSTVDLKLNLNLSSSSCSSSLNNESVSASSVNVDKNKEKNGGAAAPTSTPPVTRSTDPAKPPAKAQVVGWPPVRSFRKNIVSGQKSNKEEVEKPATTTVGQTATATSAATSGNGGAYVKVSVDGAPYLRKVDLKQYKSYRELSDALAKMFSGTMIEPAVSGPHHEFKGNGLFSFNGSDYVPTYEDKDADWMLVGDVPWEMFVESCKRLRIVKGSEATGLGVPRAAAEEQCKIRS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01983 283 Pfam AUX/IAA family 15 269 IPR033389 -
Aip09g01983 283 Gene3D - 159 274 - -
Aip09g01983 283 SUPERFAMILY CAD & PB1 domains 159 259 - -
Aip09g01983 283 PANTHER AUXIN-RESPONSIVE PROTEIN IAA16 11 272 - -
Aip09g01983 283 MobiDBLite consensus disorder prediction 28 51 - -
Aip09g01983 283 MobiDBLite consensus disorder prediction 64 103 - -
Aip09g01983 283 ProSiteProfiles PB1 domain profile. 164 267 IPR000270 GO:0005515
Aip09g01983 283 MobiDBLite consensus disorder prediction 19 51 - -
Aip09g01983 283 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 272 IPR003311 GO:0005634|GO:0006355
Aip09g01983 283 MobiDBLite consensus disorder prediction 64 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01983 Aip-Chr9 67302254 67306758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01983 166 270 B3 DNA Binding Superfamily AT5G20730 31.429 1.05e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aip09g01983 AUX_IAA 1.8e-72 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01983 K14484 - gmx:100796888 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01983 09 67302254 67306758 Aip09g01983 09 67302254 67306758 ECH