Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01981 ATGGCTGGTAACAATAATAACGGGTCGGAAGGTTTGGGCGACGATTTCTTCGAACAGATCTTGGCGGTTCCAAGTGAGTATGGCGGCGGTGGCGGTAGAACATTAGTGGGGTCCATGCCAATGGTGCTTCAGTTGGGGTCCACAGTATCAAGCACTACTGTTCCGGATGGCTTAAGAATGGGGATGCCTTTGGGTTTGAATTTGGAGCAAACTGGTTTCCTTAGACGCTTTCCTGAACAAGTTTCTGATGTTGAGGCTGCCATTAACAACAACCACCACCACCAACAACAATACCTTCGTCTTAGTAACAATACCAACAACAACAATATTAATAATAATAATAATAGCTCTCCATCTTCCTCTTCTACTGCTGGAATCACTACTGATCGGGATTCGATGCACATGAGAGGTTTGTTTCCAGCGTTTGGACAGTTGCATAATACTACCCCCCTTCCTCCTCCTACTCAGCCACCTCTTCGCCCCACTCTTCCATCTCCTCTCCACCACCACCAGGCATTTCAGAGGCAGCAAGCACCAAATCCAGTGTCTGTGACTGCTCTGCCACAACAACCACCGGGGATACGCCCTCGAGTGCGAGCAAGAAGAGGCCAAGCTACCGATCCTCACAGTATTGCTGAGAGGTTACGTCGTGAGAGGATTGCCGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAATAAGACGGACAGAGCAGCCATGCTTGATGAAATTGTGGATTATGTCAAGTTTCTAAGGCTCCAAGTTAAGGTATTGAGCATGAGTAGACTAGGTGGGGCTGGCGCTGTTGCCCAGCTTGTGGCTGATGTTCCTCTATCTGCTGTCGAGGGTGAGGAAATAGAAGGCGGAGGGAACAACGAGCAAGCATGGGAGAAATGGTCAAATGATGGAATAGAGCAACAAGTTGCAAAGTTAATGGAAGAAGATGTTGGAGCTGCCATGCAATTCCTTCAGTCCAAGGCACTTTGCATTATGCCTATTTCTCTTGCCTCTGCCATCTTCCGTATGCCTCCTTCAGACCCATCATCACTCATCAAGCCTGAATCTAACTCCCATTCATAG 1086 0.4797 MAGNNNNGSEGLGDDFFEQILAVPSEYGGGGGRTLVGSMPMVLQLGSTVSSTTVPDGLRMGMPLGLNLEQTGFLRRFPEQVSDVEAAINNNHHHQQQYLRLSNNTNNNNINNNNNSSPSSSSTAGITTDRDSMHMRGLFPAFGQLHNTTPLPPPTQPPLRPTLPSPLHHHQAFQRQQAPNPVSVTALPQQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVEGEEIEGGGNNEQAWEKWSNDGIEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPPSDPSSLIKPESNSHS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01981 361 MobiDBLite consensus disorder prediction 103 128 - -
Aip09g01981 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 204 253 IPR011598 GO:0046983
Aip09g01981 361 Pfam Helix-loop-helix DNA-binding domain 209 253 IPR011598 GO:0046983
Aip09g01981 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 263 IPR036638 GO:0046983
Aip09g01981 361 MobiDBLite consensus disorder prediction 143 208 - -
Aip09g01981 361 SMART finulus 210 259 IPR011598 GO:0046983
Aip09g01981 361 Gene3D - 199 261 IPR036638 GO:0046983
Aip09g01981 361 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 348 - -
Aip09g01981 361 MobiDBLite consensus disorder prediction 150 164 - -
Aip09g01981 361 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 10 348 - -
Aip09g01981 361 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01981 Aip-Chr9 65915841 65923043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01981 166 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 73.196 1.96e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip09g01981 HLH 3.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01981 - - lang:109355094 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01981 09 65915841 65923043 Aip09g01981 09 65915841 65923043 ECH