Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01979 ATGCATTTCTTAGGGATCCGTATAACCTGCTCTGTTTGTTCTTCCAACATTGGTCGTCAGAGTTTATTTTCCACCATGGCAAACAAGAAGATAGCAGATGCTAAACTCGCGAAAGATTTTCAGGCCGTGTTGAAAGAATTTCAGATGGCACAGCGACTTGCGGCAGAGAGGGAAATAGCTTACACCCCAATGTTCCACAAGCAGCTCCATCCAGGTGATTAG 222 0.4505 MHFLGIRITCSVCSSNIGRQSLFSTMANKKIADAKLAKDFQAVLKEFQMAQRLAAEREIAYTPMFHKQLHPGD 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01979 73 Pfam Syntaxin-like protein 24 61 IPR006011 GO:0016020
Aip09g01979 73 Gene3D - 14 64 - -
Aip09g01979 73 PANTHER SYNTAXIN-21 27 71 - -
Aip09g01979 73 PANTHER SYNTAXIN 27 71 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01979 Aip-Chr9 65471987 65472554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01979 29 69 SNARE and Associated Proteins AT5G16830 80.488 3.57e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01979 - K08488 soe:110791731 70.4774