Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01976 ATGGTGGGTGGCCAGTTCTTCATTAGATGTGGTCTGCATCATCTTGTGCAAAGTCCAGTAATTGATGTTTCAATTTTTTGGGTGATTTTGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAACAAATGGAGATTTATACTATGGTCTATTCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAATGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTAAACTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGGTCATCAAAGGCACCTGATGTATCAAAGCTAGTTTTCGAAAGCAAATTGCCTATTCTAAGTGATGAAAAACTATCATTGAAGGTATTGCTTTCCGAGGCAAAAAAATGA 471 0.414 MVGGQFFIRCGLHHLVQSPVIDVSIFWVILECNLYQLMKDREKMFSEGEQMEIYTMVYSDFGLAREISSQPPYTEYVSTRWYRAPEMLLQSYLYSSKVDMWAMGAIMAKLFSLRPLFPGARSSKAPDVSKLVFESKLPILSDEKLSLKVLLSEAKK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01976 156 Pfam Protein kinase domain 59 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01976 156 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 29 50 - -
Aip09g01976 156 Gene3D Transferase(Phosphotransferase) domain 1 59 122 - -
Aip09g01976 156 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 59 128 - -
Aip09g01976 156 SUPERFAMILY Protein kinase-like (PK-like) 32 122 IPR011009 -
Aip09g01976 156 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 29 50 - -
Aip09g01976 156 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01976 156 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 59 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01976 Aip-Chr9 64792092 64795168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01976 21 119 MAP Kinase Gene Family AT4G11330 31.783 1.12e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip09g01976 Pkinase 8.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01976 K08829 - aip:107619606 210.305