Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01959 ATGGGGACTCCAGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGATCCAGATATCTGTTGGATTGATGGACAGGTATCAAAAATCACCGGAAAGGATGCTGAAATTGAAACTACCAATGGAAAAAAGGTGGTTGCAAATTTATCAAAAATATATCCCAAAGATATGGAAGCTCCTCCTGGTGGAGTGGATGATATGACTAAGTTGTCCTATTTACATGAACCTGGAGTCCTGCAGAATTTGAAAGCTAGATATGAATTGAATGAAATATATACATATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAAACTACCACATATCTATGGTGCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGATTAATGAAGGGAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGCAAAACTGAAACCACAAAAATGCTTATGCAATTCCTTGCTTACCTAGGTGGTAGGGCTGGCACTGAAGGCCGAACAGTTGAACAACAAGTTCTCGAGTCAAATCCAGTTCTAGAAGCATTTGGCAATGCAAAAACTGTCAGGAATAACAATTCTAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGATAAAAGTGGAAGAATCTCAGGAGCAGCCATCAGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAAGTTAATGATCCTGAACGCAACTATCATTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAGATACAAATTAGGAAGTCCTAAAACTTTTCACTACCTTAACCAGTCAAAATGCTATGAATTGGCTGATGTAAGTGATGCTCGTGAGTTTCTTGCCACCCGTAGAGCTATGGATATTGTTGGAATCAGCCAAAAGGATCAGGAAGCCATTTTTAGAGTTGTTGCTTCAATTCTCCATCTTGGTAATATTGACTTTACCAAAGGAAAAGAAGTTGACTCATCAGTTCCGAAAGATGACAAAGCCAAATTCCACCTTCAAACTACTGCTGAGCTTCTAATGTGTGATGCCAATGCTTTGCAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAACAGTGAGTAGAGATGGACTGGCAAAAACAATTTATTCTCGGCTGTTCGACTGGTTGGTGGACAAGATTAATAGTTCAATTGGACAAGACCCCAATTCTAAAACTTTGATTGGAGTCCTTGACATATATGGTTTTGAAAGTTTTAAAACTAACAGTTTTGAACAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAACAGCATTTCAATCAGCACGTTTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAAATTAATTGGAGCTACATTGAATTTGTTGATAACCAAGATGTTTTAGACCTTATTGAAAAGAAACCTGGAGGAATCATTGCTCTCCTAGATGAAGCTTGCATGTTTCCAAAGTCTACGCATGAAACTTTTGCAAACAAGCTTTATCAAACATTTAAGAACCACAGGCGCTTTATTAAGCCAAAATTGTCTCGAACAGATTTCACGATTGCTCACTATGCTGGGGAGGTTTTATACCAGTCTGATCAATTTCTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGAGTGCTTCCAAATGTCCTTTTGTAGCTGGCCTTTTTCCACCACTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAAAGTCTAATGGAGACATTAAATTCTACAGAACCCCATTACATCAGATGTGTGAAACCAAATAACCTCTTGAAGCCTGCTATTTTTGAGAATGCCAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGCGCTTTTTTTGAATTTGTGAACAGATTTGGCCTTCTTGCTCCGGAGGCCACAGAAGCAAACTATGATGAAAAGACTGCTTGCCAAAAGATTCTGGAAAAGATGGGGCTTAGTGGATATCAGATTGGAAAGACAAAGGTATTTCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACGTAGAGCTCAAGTACTCAGTAATGCAGCAAAAAGTATCCAGCGGCGCATAAGAACTCATCAAGCACGTAATCATTATCTTGCGCTTCGAAAGAAGACCATATATCTGCAGTCTCGGTGGAGAGGAAGACTTGCATGCAAACTATATGAAAACATGAGAAAGGAGGCTGCTGCTGTGAAAATTCAAAAGAACACACGCAGATATCAAGCTCGGAGAGCCTACAAGAAACTTCATGTGTCAGCATTGACAGTTCAAACAGCTTTAAGGGCAACAGCTGCTCGCAAGGAGTTCAGATTTAGGAAGCAGACCAAAGCCTCCATTATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCATTATATTATAAGAGGCTCAAGAAAGGGACAATAGTTACACAATGCAGATGGAGGGGACGTGTAGCGAGAAGAGAACTTAGGAAACTAAAAATGGCTGCAAGAGAAACTGGTGCACTTCAAGAAGCGAAGGATAAGCTTGAGAAACGTGTGGAGGAACTCACTTGGCGTCTCCAGCTAGAAAAAGGATTAAGGACGAATCTAGAAGAATCCAAATCTCAAGAGATAGCAAAACTGCAGAATCAATTGCAGGAGATGCAGAGCAAATTTGAGGAGACCAATGCTCTGCTTTCCAAGGAGCGTGAGAATGCAAAGAAAATTAGTATAGAAGCAGTTCCTGTTATTCAAGAGAAACAGGTTATCGTTGAAGATACACAGAAGATTGACGCACTGACGGCAGAAATTGAGAGCCTAAAGACGTCACTCGAGTCAGAGAAACAGAAATCTAATGACTTTGAACAAAAATATAATGAAGCCCAAGCTAGCAGTGAAGAAAGAGGTAAAAAGTTAGAAGACACAGAGAAGAAGGTTCGTCAACTCCAAGAATCATTGAAGGGGCTAGAAGAGAAGATTAATAATGTAGAATCAGAGAATCAGGTTCTACGTCAACAAGCTGTATCGACCAAGTTCCTCCACAGACGCCAGAGCTCACTTGCCCAGACTAATCAGGAACTTCAAACTAGCCCATCAATGAACCTGAGGGAATCCTCTGAAGTGGATGATAAACCACAGAAGTCACTAAATGAGAAACAACAAGAGAATCAAGAATTACTCATTAGATGCATTGCACAACATCTAGGATTTGCTGGAAACAGACCAATTGCTGCCTGTATCATATATAAGTGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGCACTAGCGTTTTTGATAGAATCATCCAGACTATTGGCCATGCAATTGAGACCCAGGATAATAATGATGTCTTAGCTTACTGGTTATCCAATGCCTCGACACTTCTCTTGTTACTCCAACGCACACTCAAGGCAAGTGGTGCTGCTGGAATGGCTCCACAACGCCGTCGTTCTCAATCAGCAACCTTATTTGGGAGGATGACTCAGAGTTTCCGTGGAAGTCCAGCAGGAGTCAATCTGTCCTTAATTAATGGTAGTTCAAGTAGAGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTGTGCATTCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAGGGATCGTCACGTTCTGTTGCAAACACTGAAGCCCAGCGAGCTTTGATTGCTCATTGGCAGGGGATAGTTAAGAGCCTAGGGAACTTTTTAAATACATTGAAAGCAAATCATGTTCCACCATTTTTGGTTCGTAAGGTGTTCACGCAAATTTTTTCTTTCATCAATGTACAACTATTCAATAGTCTTCTTCTTAGACGAGAGTGTTGCTCATTTAGTAATGGAGAATATGTAAAAGCTGGTTTGGCTGAACTAGAGCATTGGTGTTATAAGGCAACGGATGAGTATGCAGGTTCAGCTTGGGATGAGCTCAAACATATTAGACAAGCCATTGGATTTCTGGTTATACATCAAAAACCGAAGAAGACACTGGATGAAATAAGTCATGACCTATGCCCAGTCCTCAGTATACAGCAGTTATATCGGATTAGCACCATGTATTGGGATGACAAATATGGCACGCATAGTGTGTCACCTGAAGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATTTCAAAGTCAATGGAACAAATAGATATCTCTGATATAGATCCACCGCCACTTATACGGGAAAACTCCGGGTTTAGCTTTTTATTACCACGCCCAGCTTGA 4548 0.4037 MGTPVNIIVGSHVWIEDPDICWIDGQVSKITGKDAEIETTNGKKVVANLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQKLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMQFLAYLGGRAGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEIERYKLGSPKTFHYLNQSKCYELADVSDAREFLATRRAMDIVGISQKDQEAIFRVVASILHLGNIDFTKGKEVDSSVPKDDKAKFHLQTTAELLMCDANALQDALCKRVMITPEEVIKRSLDPQSATVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKTLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHRRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFGLLAPEATEANYDEKTACQKILEKMGLSGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKSIQRRIRTHQARNHYLALRKKTIYLQSRWRGRLACKLYENMRKEAAAVKIQKNTRRYQARRAYKKLHVSALTVQTALRATAARKEFRFRKQTKASIIIQARWRCHKAALYYKRLKKGTIVTQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNLEESKSQEIAKLQNQLQEMQSKFEETNALLSKERENAKKISIEAVPVIQEKQVIVEDTQKIDALTAEIESLKTSLESEKQKSNDFEQKYNEAQASSEERGKKLEDTEKKVRQLQESLKGLEEKINNVESENQVLRQQAVSTKFLHRRQSSLAQTNQELQTSPSMNLRESSEVDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSQSATLFGRMTQSFRGSPAGVNLSLINGSSSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIDPPPLIRENSGFSFLLPRPA 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01959 1515 CDD MyosinXI_CBD 1096 1481 IPR037975 GO:0007015
Aip09g01959 1515 Coils Coil 877 904 - -
Aip09g01959 1515 PANTHER MYOSIN-9 6 1512 - -
Aip09g01959 1515 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 CDD MYSc_Myo11 76 720 IPR036018 -
Aip09g01959 1515 Gene3D - 439 623 - -
Aip09g01959 1515 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 MobiDBLite consensus disorder prediction 987 1021 - -
Aip09g01959 1515 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 SMART iq_5 782 804 IPR000048 GO:0005515
Aip09g01959 1515 SMART iq_5 830 852 IPR000048 GO:0005515
Aip09g01959 1515 SMART iq_5 757 779 IPR000048 GO:0005515
Aip09g01959 1515 SMART iq_5 734 756 IPR000048 GO:0005515
Aip09g01959 1515 SMART iq_5 805 827 IPR000048 GO:0005515
Aip09g01959 1515 SMART iq_5 853 875 IPR000048 GO:0005515
Aip09g01959 1515 Gene3D - 833 882 - -
Aip09g01959 1515 Gene3D - 734 784 - -
Aip09g01959 1515 Gene3D - 785 832 - -
Aip09g01959 1515 ProSiteProfiles IQ motif profile. 735 762 IPR000048 GO:0005515
Aip09g01959 1515 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Aip09g01959 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Aip09g01959 1515 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Aip09g01959 1515 Gene3D - 252 310 - -
Aip09g01959 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 785 IPR027417 -
Aip09g01959 1515 Gene3D - 667 733 - -
Aip09g01959 1515 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 ProSiteProfiles IQ motif profile. 831 858 IPR000048 GO:0005515
Aip09g01959 1515 PANTHER MYOSIN 6 1512 - -
Aip09g01959 1515 MobiDBLite consensus disorder prediction 1082 1096 - -
Aip09g01959 1515 Coils Coil 968 1051 - -
Aip09g01959 1515 MobiDBLite consensus disorder prediction 1064 1081 - -
Aip09g01959 1515 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Aip09g01959 1515 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Aip09g01959 1515 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Aip09g01959 1515 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Aip09g01959 1515 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Aip09g01959 1515 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Aip09g01959 1515 ProSiteProfiles Dilute domain profile. 1145 1458 IPR002710 -
Aip09g01959 1515 Coils Coil 912 950 - -
Aip09g01959 1515 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g01959 1515 Pfam DIL domain 1334 1437 IPR002710 -
Aip09g01959 1515 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Aip09g01959 1515 MobiDBLite consensus disorder prediction 1064 1097 - -
Aip09g01959 1515 SMART DIL_2 1333 1440 IPR002710 -
Aip09g01959 1515 Gene3D Kinesin motor domain 65 662 IPR036961 -
Aip09g01959 1515 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01959 Aip-Chr9 63493375 63507999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01959 1 1512 Myosins gene family AT1G54560 82.646 0.0 2655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01959 K10357 - gmx:100816792 2734.9