Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01950 ATGGCTTCGCCTTCTCCGTCAATGGAAAGAAGGGGTGCCGGGGATGAAGATACCACTGGGGGCGTGTGTGTAACAGAGGAAACAAAAATGTGCAACGGAGCAGACGATGGAGTTGGATCGGTTGAGGGCAAAGGCTTTGCAGGGATAGAGTCGGACGAGTACGATTTACAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCAACAATGTTGTCAACAATTTGGACGGCATCGGAGGAATGTCTGACAATTATGCGGATGATGACTTGTACGCTGTTGATTCTGGCAAATCGATAGGTTTGATTGATTTTTTGAACTTGAGCGAGGAGGAGGTTCTCCGCTTTAATTTCGCAGATGTTGACATTGCATTTGTGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCAAGACGTTCCAGAAGCGCAAAATGTGGCGAAGTAAGGATACAGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACCCAATGCCTAACCGGCAAAAGAGGCCAAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTTCGCATGGACGATGAATCAGGACGTTGA 609 0.4992 MASPSPSMERRGAGDEDTTGGVCVTEETKMCNGADDGVGSVEGKGFAGIESDEYDLQEDETEHDHHAEADVNNVVNNLDGIGGMSDNYADDDLYAVDSGKSIGLIDFLNLSEEEVLRFNFADVDIAFVFYQQYAKHHGFGARRSRSAKCGEVRIQQEFVCHRQGYRSPKFYPMPNRQKRPRAETRCGCPARMLLRMDDESGR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01950 202 Pfam FAR1 DNA-binding domain 129 199 IPR004330 -
Aip09g01950 202 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 70 201 - -
Aip09g01950 202 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 70 201 - -
Aip09g01950 202 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01950 Aip-Chr9 62028883 62029630 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01950 FAR1 3.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01950 - - aip:110265290 290.041