Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01923 ATGGATCATCTTGATCCTCCATATTCTTTTCTGCATTCCTCACCAACCCTCACTCTTCGCTGCCGCTGTCACGGTTGCACCGCTGTCACTTCGTTTTCTCACGTCGCCGCGTGCTCTGTTGCTGCCGTGCCGCTGTTGCTCCCCACTGTCGCTCCTCTTGCTCGTGCCGCCGCCGCTCCTTCTCTCTGTTGCTGCCGTCGCTCCTCCTACTTTGGTCCTTTTCTGCTCTCTCTCAATCAAGCTCACAAGGTTAGCTCAAGCGAGACCATAGTTTTTGCATCTCCTGAAGCATTGAGTCCTTTACAATTGAGCCTGAAGATTTTTCTTGTATACTTGCTGCTTTGGTACAAGGAACAAGAAAATTGGAGTTCAAAAGTGAATGTAGCCGTGCTAGTTGTTCCAATAATACATTCAAAAGAAAAGAAGAGGAAACTGAGGAACAATGCATTGAACAATACATTAGACTTAGAACACATTGATGTTATTATCTGTCTTATAGGAAATCCAGTGTGCAGTGTTCTCTCAAACACAAACTACTGCCAACTTCAGCAGCAGCCTAAGCACTTAAAGCACTTGCTTGGGGAAGATCTTGGACCATTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTTGAAGGTGCTTTAGCACAGGCCAGGCAGAGGAAGGTGCTACTGTCAATATGTTCATTGCTAACAGGTCCTACTGTCAATATGGATGAGTTAAGACAATTCAAACATGGCTAG 747 0.4565 MDHLDPPYSFLHSSPTLTLRCRCHGCTAVTSFSHVAACSVAAVPLLLPTVAPLARAAAAPSLCCCRRSSYFGPFLLSLNQAHKVSSSETIVFASPEALSPLQLSLKIFLVYLLLWYKEQENWSSKVNVAVLVVPIIHSKEKKRKLRNNALNNTLDLEHIDVIICLIGNPVCSVLSNTNYCQLQQQPKHLKHLLGEDLGPLSIKELQNLEKQLEGALAQARQRKVLLSICSLLTGPTVNMDELRQFKHG 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01923 248 Coils Coil 202 225 - -
Aip09g01923 248 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL6 ISOFORM X1 176 225 - -
Aip09g01923 248 Pfam K-box region 183 224 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aip09g01923 248 PANTHER MADS BOX PROTEIN 176 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01923 Aip-Chr9 59110144 59115250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01923 190 224 MADS-box Gene Family AT2G45650 62.857 1.49e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01923 K09264 - aip:107619340 115.931