Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01912 atgctgggctctaggatcagCTTCATCGTCGCGATCGAACCCAGCCCTGGTCGCCTGTCTCTGTGGCGGTGCTGCTCGCCTCATCTTCTCGAACCCAGCCCTGGTCGTGGTGCTCCTCGCCTGTCTCTGTCGCGGTGCTGCTCGCCTCATCTTCTCAAACCCAGCCCTGGTCGTGGTGCTCCTCGCCTGTCTCTGTCGCGGTGCTCCTTGCCTGTCTCTGTCGCGGTGCTGCTCGCCTCATCTTCTCGAACCCAACCCTGGTCGTGGTCCTGCTTGCCTCTCTCTGTCGCGGTTCTGCTCAGCCTCATCATCTCCAACCCAGCCCTGGTCGTGGTGCTGCTCGCCTCTCTCTGTGTCGCGGTTCTGCTCGCCTCTCATCCCGCATCTAGCATCAAGGAATCATTTACTGAAAACATTCTGTGTGAACTTGTTAGAGGAATTGCTGGGGATATTGTAGAAGAGACTGACACAGCCTCAGTGTTGTTAAAAGCTATTGGGTATATCAGATTCCTTCAAAGTCAAATTGAGGCCCTTAGTTTACCATACTTGAGCAATGGATCAGGGAACACAAGGCATCAACAACATTCTAGCTTCAGAGATTTACACAAACATGTAAAAGTGACGGTTCTCTTGATTTTTTGGTGGTTGGTGATTGGGGAAGAAGAGGTGAATATAACCAATCTGAAGTTGCTTACCAGCTACTGCATGAAAACTGCTTGA 720 0.5042 MLGSRISFIVAIEPSPGRLSLWRCCSPHLLEPSPGRGAPRLSLSRCCSPHLLKPSPGRGAPRLSLSRCSLPVSVAVLLASSSRTQPWSWSCLPLSVAVLLSLIISNPALVVVLLASLCVAVLLASHPASSIKESFTENILCELVRGIAGDIVEETDTASVLLKAIGYIRFLQSQIEALSLPYLSNGSGNTRHQQHSSFRDLHKHVKVTVLLIFWWLVIGEEEVNITNLKLLTSYCMKTA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01912 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 183 IPR036638 GO:0046983
Aip09g01912 239 CDD bHLH_AtbHLH_like 131 179 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01912 Aip-Chr9 57383453 57388701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01912 154 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 76.744 3.55e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01912 - - aip:107608127 141.354