Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01904 ATGAGTGAAAGAGGGAAAAAGGAGAAGCAAACGGAGAAAAAGGAGAGAATGAAAAACATTTTCAAGAAGCTTCACATAGGGAGCAGTAGCCACGATCCTAACCGATCCAATGAGATTCAGCCAACTGTCCCCTCGCCGTCGTGCGCCGCTGATCACCGTGCTGCTGTAGCATCACAGAATACCGGCGTATCTCCGGCGAGCCCGTCGCCGTCGTCCTCTCCCTCTGCGGCGCCGTCTGTCGCTCCGTCTGGTGTCGGCGGCGCCGCCGCTGCGATCGTCAACCGGCAGGACTTCTTCTCGTCGGAAGAGGAGTTTCAGGTGCAGTTGGCCCTAGCAATCAGCGCTTCGAACTCGGATTTCGGTGGCGATCGCGAGAAGGATCAGATCCACGCGGCGACGCTGCTGAGTCTTGGAGGACACCGAATTGATTCGGCGAGGAGCAAGGATGAGGTTGCCGAGGCGCTGTCGAGGCAGTACTGGGATTACAATGTGCTTGACTATGAGGAAAAAGTGGTAGATGGTTTTTATGATGTTTTTGGGCTTTCTGCTGATTCTGCAATGCAAGGAAAGATGCCATCCCTAAGAGACCTCGAAACAGATCCTGGGGATTCTAGCTATGAAGTGGTCATAGTTAATCGAACAGTTGATCCTGCCTTGGAAGAGCTAGTGCAAATTGCACATTGTATTGCATTAGACTGCCCTGTCACCGAGGTTGGTATTTTGGTACAAAGGCTTGCTGAACTTGTTACAAGCCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTGGCGAGATGGACGGAAAGGAGTACGGAATTAAGGACATCACTTTCAACAAGTTTATTGCCTATTGGGTCCTTAAATATTGGGCTCTCTAGACATCGTGCGTTGCTTTTCAAGGTATTGGCCGACAATATTAAGATGCCTTGTAGGCTGGTAAAAGGTAGTCATTATACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTAGAGGATGAAAGGTTAAAGTTTTTAATACCTTTGTATGCTTCTTGTGTATTTGTTGTTCTCTGCATGTCCCCTGAGTATGCACGACCTAGCTTGGGTTTCAGCAAAGACGTTGGTGTTGGTCCTTCTAAGATACCTAATAAAAGAAATACGGAAATTTCACCACCATACTCTGGTGCTTCTCTGTACAAAGGGACTCTTGGAATGAATGCAGTTGGTGATGGGACGAGATTAAATGTAAATGTTGTACCATATGCTCAGAACAACCCCAATGATTCTCATAGCCTTTTTGCAGATCTTAATCCATTTCAGATAAAAGGAACTGGGAAGACATCTGTGCATAATATACCTGTTGAAAATAAAGCTCCTGAGCTCCAGAGTACAAGAAAAAATACTGTTCCTGGGCAACCCCCTGTACCATGGAAGAATTGTTATGCTTACAATGAAGTTTCCAGGAAAAATAATCGTAATCCTAATGACTACAGTCCTACATTATTAGTTTCTAATAATTCTTCCGTGTCTGAAAAGGTTAATCTCAGTGGTAGAAAATCACCATACAGTTCAAATGTAAATAATAACATAAATGTTCAAACTCCACCGCAAGTTACTGGTTCCATGATAGCACCTGCAGCAATTGAACAGAACTGGATTCAGGATCTTAATGCTGATCACAATGGGGGACATGTGGAGCATTCTCAGAATGTCATGTCAGAGGCTTTTAAAGAACATGAAAACAGTGAAATCAGAGATATTGATTGGAGGGCGTGCACACATGACAGATTCATGGGAAGCAATTTAAAACTAAAGGAACCAGAGAGTCCTAGTTCATCAGTTGATTCTATTTCAAACAGGCCCAGGGTTGATCCAAATCCACCAATGTTGGATGATGTAGATGTTGGTGAATGCGAGATTCCATGGGAGGATCTGGTTATTGGAGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATACCATGCAGACTGGAATGGCACAGAAGTTGCTGTGAAGAAATTTTTGGACCAGGATTTTTCAGGTGCTGCCTTGTCCGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACCCGTCCTCCCAATCTTTCAATTATTTCAGAGTTTCTTCCAAGAGGAAGCTTGTACCGAATTCTTCACCGGCCTAATTGTCAGATTGATGAGAAACGAAGGATAAAAATGGCTCTGGATGTGGCCAGGGGAATGAATTGCTTACACACTAGCACACCAACTATTGTTCATCGTGATCTAAAGTCCCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGTTTATCACGCCTGAAGCACAACACATTTCTATCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCAAATGAGAAGTGTGATGTTTACAGTTTTGGGGTCATCCTATGGGAGCTTGCGACTCTAAGGTTGCCATGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTAGGTTTCCAGAACCGTAGACTTGATATTCCCAAGGAAGTTGATCCTTTAGTTGCAAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGTCCCTCTTTTGCACAGCTCACAGTGGCACTAAAATCCCTTCAGCGTCTAGTTATCCCATCTCATCAAGACCAGGTAGCATCACCTTTGCCGCAGGAGATTTCTGTAAATTCTACCCCCTGA 2766 0.4436 MSERGKKEKQTEKKERMKNIFKKLHIGSSSHDPNRSNEIQPTVPSPSCAADHRAAVASQNTGVSPASPSPSSSPSAAPSVAPSGVGGAAAAIVNRQDFFSSEEEFQVQLALAISASNSDFGGDREKDQIHAATLLSLGGHRIDSARSKDEVAEALSRQYWDYNVLDYEEKVVDGFYDVFGLSADSAMQGKMPSLRDLETDPGDSSYEVVIVNRTVDPALEELVQIAHCIALDCPVTEVGILVQRLAELVTSHMGGPVKDASIMLARWTERSTELRTSLSTSLLPIGSLNIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDERLKFLIPLYASCVFVVLCMSPEYARPSLGFSKDVGVGPSKIPNKRNTEISPPYSGASLYKGTLGMNAVGDGTRLNVNVVPYAQNNPNDSHSLFADLNPFQIKGTGKTSVHNIPVENKAPELQSTRKNTVPGQPPVPWKNCYAYNEVSRKNNRNPNDYSPTLLVSNNSSVSEKVNLSGRKSPYSSNVNNNINVQTPPQVTGSMIAPAAIEQNWIQDLNADHNGGHVEHSQNVMSEAFKEHENSEIRDIDWRACTHDRFMGSNLKLKEPESPSSSVDSISNRPRVDPNPPMLDDVDVGECEIPWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQQDPNLRPSFAQLTVALKSLQRLVIPSHQDQVASPLPQEISVNSTP 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01904 921 Pfam Ethylene-responsive protein kinase Le-CTR1 152 336 - -
Aip09g01904 921 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 89 339 - -
Aip09g01904 921 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 368 913 - -
Aip09g01904 921 MobiDBLite consensus disorder prediction 57 79 - -
Aip09g01904 921 CDD STKc_MAP3K-like 646 889 - -
Aip09g01904 921 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
Aip09g01904 921 Gene3D Transferase(Phosphotransferase) domain 1 719 902 - -
Aip09g01904 921 SUPERFAMILY Protein kinase-like (PK-like) 630 911 IPR011009 -
Aip09g01904 921 MobiDBLite consensus disorder prediction 1 22 - -
Aip09g01904 921 PANTHER SERINE-THREONINE PROTEIN KINASE 89 339 - -
Aip09g01904 921 MobiDBLite consensus disorder prediction 483 523 - -
Aip09g01904 921 MobiDBLite consensus disorder prediction 30 44 - -
Aip09g01904 921 PANTHER SERINE-THREONINE PROTEIN KINASE 368 913 - -
Aip09g01904 921 PRINTS Tyrosine kinase catalytic domain signature 863 885 IPR001245 GO:0004672|GO:0006468
Aip09g01904 921 PRINTS Tyrosine kinase catalytic domain signature 800 810 IPR001245 GO:0004672|GO:0006468
Aip09g01904 921 PRINTS Tyrosine kinase catalytic domain signature 714 727 IPR001245 GO:0004672|GO:0006468
Aip09g01904 921 PRINTS Tyrosine kinase catalytic domain signature 753 771 IPR001245 GO:0004672|GO:0006468
Aip09g01904 921 PRINTS Tyrosine kinase catalytic domain signature 819 841 IPR001245 GO:0004672|GO:0006468
Aip09g01904 921 MobiDBLite consensus disorder prediction 595 624 - -
Aip09g01904 921 MobiDBLite consensus disorder prediction 600 615 - -
Aip09g01904 921 SMART serkin_6 640 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01904 921 MobiDBLite consensus disorder prediction 1 84 - -
Aip09g01904 921 ProSiteProfiles Protein kinase domain profile. 640 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01904 921 Pfam Protein tyrosine and serine/threonine kinase 641 890 IPR001245 GO:0004672|GO:0006468
Aip09g01904 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 759 771 IPR008271 GO:0004672|GO:0006468
Aip09g01904 921 Gene3D Phosphorylase Kinase; domain 1 633 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01904 Aip-Chr9 55864187 55872624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01904 17 876 MAP Kinase Kinase Kinase AT1G08720 54.313 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip09g01904 PK_Tyr_Ser-Thr 8.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01904 - - lja:Lj5g3v1426480.1 1209.51