Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01903 ATGCAACGCAAGAGAGGAGGCTGTTCCGCCATGCACTGTCATCGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTAGGGCTTGCCGTGCTCCTGCAACAATATATTTTAGAAGTTGTATTGGACTGGAAGAGAGGGAAGGGGAGCGATTGTGAATGCAGAAGTTTAGACCTCTTCATATATGGGAACAATGTTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGCAAGGGAATTACAGTACTTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTTATACCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTCGCCAAAAGGGCTGTTTTCGCCGGAGCCAGAACATTATCAAGGACCAAAGCTGAAAGTTTCCATCATTGGAGCTGGGCTTTCTGGCATGTCAACTACAGTGGAACTCTTGAATCAAGGACACGAGTCCCAGAAGAATACACAGGTGTTGCAGAAACTGATTTTCTGACTTCAAGTGTAGTTTGTGGCGTCTTCAACAAAAATTTGGGTATGCTCGTGAACTATCTTTCAACATTCAATAAGACTTTATCTTGGAGCAAAATTTGGTGGCTCACCCAGCACCACCAGCGTCTACTGTCTTTGCCGCCGCTCCTCTGTTTCACAAATTCCTTTTCTTTGATTCTGCCTGCTGCTCTTCTGTCCTGTGCTATCCGGGGCTGTTATTTCCAACAAGGTATGGAGGTTAAGATGGAAATGAAGGTGGAAGATGCATATAGGAAGTCAATGGAGACAGTGTTGAATTGGATACAAGATACTGTAAATCTTAACAAGAGTCAAGTTTTCTTTCGTATATATGCACCCGTGCACTTCAGAAGTGGAGATTGGAGAAGCTATGGAAGTTGTCATTTGGAAACACTGCCAGAGCTTAACATGTCATTGGTGCCTAATGATAACTGGTCACAATTCAAAATAGGCAATTCATTGCTATCATCACACAAAAACAACACTGAACTTGTCAAGTTGAAAATATTGAATATAACAGAGATGACAGCTCAGAGAAAAGATGGACACTCATCAATCTACTATCTTGGTCCGAATGGCGGCACGGCAGCACTCCATCGGCAAGATTGCAGCCACTGGTGTCTGTTGGTGTACCTGATACATGGAATGAGCTGCTTTATGCAATGTTCATGA 1272 0.4387 MQRKRGGCSAMHCHRSWGRLKPPPQLGLAVLLQQYILEVVLDWKRGKGSDCECRSLDLFIYGNNVDRFLNWSTRFQIVLGVARELQYFHEDSHLRIVHRDIKASNILLDHKFYTKIGDFGLARFFPEDQAYLSTQFAGTFAKRAVFAGARTLSRTKAESFHHWSWAFWHVNYSGTLESRTRVPEEYTGVAETDFLTSSVVCGVFNKNLGMLVNYLSTFNKTLSWSKIWWLTQHHQRLLSLPPLLCFTNSFSLILPAALLSCAIRGCYFQQGMEVKMEMKVEDAYRKSMETVLNWIQDTVNLNKSQVFFRIYAPVHFRSGDWRSYGSCHLETLPELNMSLVPNDNWSQFKIGNSLLSSHKNNTELVKLKILNITEMTAQRKDGHSSIYYLGPNGGTAALHRQDCSHWCLLVYLIHGMSCFMQCS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01903 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Aip09g01903 423 Pfam Protein kinase domain 76 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01903 423 SUPERFAMILY Protein kinase-like (PK-like) 51 140 IPR011009 -
Aip09g01903 423 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01903 423 Gene3D Transferase(Phosphotransferase) domain 1 54 157 - -
Aip09g01903 423 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 10 264 408 - -
Aip09g01903 423 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 264 408 IPR029962 GO:0016413
Aip09g01903 423 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 264 408 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01903 Aip-Chr9 55569194 55572990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01903 54 144 Receptor kinase-like Gene Family AT1G70520 51.648 1.26e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g01903 PC-Esterase 1.7e-32 CL0264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01903 - - aip:107647562 616.69