Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01901 ATGACTAACAGGCTCCTCTCCAGAAAGCAATTCGTCATTGATGTTCTTCATCCAGGAAGGGCAAACGTTTCTAAGGCTGAGCTTAAGGAGAAGCTTGCTAGGATCTATGATGTTAAGGACCCCAACACCGTGTTTGTGTTCAAGTTCCGCACCCATTTCGGAGGGGGCAAATCAACTGGTTTTGGTTTGATTTATGACACTGTTGAGAATGCTAAGAAGTATGAGCCTAAGTACAGACTTATTAGGAATGGACTTGATACTAAGGTTGAAAAGTCAAGGAAGCAAATGAAGGAAAGAAAGAACAGGGCAAAGAAGATCCGTGGAGTAAAGAAGACCAAGGCTTCTGATGCTGCCAAGGCTGGAAAGAAGAAATGA 375 0.432 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01901 124 MobiDBLite consensus disorder prediction 89 124 - -
Aip09g01901 124 ProSitePatterns Ribosomal protein S24e signature. 53 75 IPR018098 -
Aip09g01901 124 Hamap 30S ribosomal protein S24e [rps24e]. 1 93 IPR001976 GO:0003735|GO:0005840|GO:0006412
Aip09g01901 124 Pfam Ribosomal protein S24e 12 90 IPR001976 GO:0003735|GO:0005840|GO:0006412
Aip09g01901 124 PANTHER 40S RIBOSOMAL PROTEIN S24 1 124 IPR001976 GO:0003735|GO:0005840|GO:0006412
Aip09g01901 124 PANTHER 40S RIBOSOMAL PROTEIN S24 1 124 - -
Aip09g01901 124 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 95 IPR012678 GO:0003735|GO:0005840|GO:0006412
Aip09g01901 124 Gene3D - 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01901 Aip-Chr9 55466462 55468065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01901 1 119 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 88.235 2.13e-76 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01901 K02974 - gmx:100499852 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01901 09 55466462 55468065 Aip09g01901 09 55466462 55468065 ECH
Aip06g01030 06 14847848 14849629 Aip09g01901 09 55466462 55468065 PCT