Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01899 ATGCTTTCCCCGTTTGTTTCGTGGCTCTTGTCTTCCACCACCTCCTCCTCTTCCTCTTCATCTTCTGATGAACAAGAACAAAGCATTGACATAGACGACACTTCAACCGACCAACCAGACCCTGAAAACGACATTGTCAACGACCAAAACGACAACAATCACCAAACAAACGGGGACGAAAATGATGAGCATTTTCTTAGTTCATGCGACGGGGACGACGCAATTCCCGTTGCTCTTGCCGTTCCCGCCACCGAACCCTCCCCGAGCCCCGCCGTCACGGTAGCCTTTACCACTGCTGATGATAGAATCCCCGTCGCAACCACAGCCGCAGCCACCACCATCGTGACACAGTCGAAACGGCAGCGTGCTGCGAACTACGCAGGCATGATTAGGCAATACCAGAGGCTTTGGACAAAGCAGGACGAGATAGAACTATTGAGAGGGTACCTTGAATACGTTAGACGAAACAAAGGCGTGAGAAAGTCCCTCCAAAACGACGTAGCTTCGTTCTACGGTGACGTGTGCCACAAGCTAAACGTGGATTTCAACAAGAACCAGCTTGTTGAGAAGCTGAGGAGGCTAAAAAGGAAACACAAGGTGACTCTGGATAAGGGCAATTTGGGAAAAGTGTCCTTCAGAAACCCTCAGGACGAGACGATTTTCGAGATTTCGCACAAGATTTGGGGCAAAGACATTGACACTGACCAATTAGTAGAAGAAGAAGAAGAAGAAGAAGAAGCATTTGATATGGATGGTGGTGGGGTTGATGATGATCATGGCAAGGTTAAGCTGAAAGTTGAAAAGGTTGTGAGTTGTGATGAGATTGAGAAAAGGGCGCCGAAGCGGCCGCGACTAAGCAAAAATCGCGACGAGACAGCAACGGCTGCTGACATGCAGATCCAGAGCTTCATTGAGGAAACCATGAGGTCTTGTTTCTCACCATTGATAAAGGAATTGTTGGATGATGAAGGAAGATCGAAGCCGGTAGAGTTTTCCCCTTCCCTTGGAGATGAGGGTGATGAGCAATGGAGGAAGCAGAGGATTTCAGAGCTCGAAGTGTATTTGAATCGGTTAGAGTTGTTACAGGATCAGATCAAGGCTAAATTAGAAGAGCTTAGGTCAGGTTCAAGGAATTGA 1137 0.4802 MLSPFVSWLLSSTTSSSSSSSSDEQEQSIDIDDTSTDQPDPENDIVNDQNDNNHQTNGDENDEHFLSSCDGDDAIPVALAVPATEPSPSPAVTVAFTTADDRIPVATTAAATTIVTQSKRQRAANYAGMIRQYQRLWTKQDEIELLRGYLEYVRRNKGVRKSLQNDVASFYGDVCHKLNVDFNKNQLVEKLRRLKRKHKVTLDKGNLGKVSFRNPQDETIFEISHKIWGKDIDTDQLVEEEEEEEEAFDMDGGGVDDDHGKVKLKVEKVVSCDEIEKRAPKRPRLSKNRDETATAADMQIQSFIEETMRSCFSPLIKELLDDEGRSKPVEFSPSLGDEGDEQWRKQRISELEVYLNRLELLQDQIKAKLEELRSGSRN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01899 378 MobiDBLite consensus disorder prediction 1 25 - -
Aip09g01899 378 Coils Coil 184 204 - -
Aip09g01899 378 MobiDBLite consensus disorder prediction 1 69 - -
Aip09g01899 378 MobiDBLite consensus disorder prediction 55 69 - -
Aip09g01899 378 Coils Coil 351 378 - -
Aip09g01899 378 PANTHER BNAANNG10740D PROTEIN-RELATED 1 374 IPR007592 GO:0006355
Aip09g01899 378 MobiDBLite consensus disorder prediction 40 54 - -
Aip09g01899 378 Pfam Protein of unknown function, DUF573 134 229 IPR007592 GO:0006355
Aip09g01899 378 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01899 Aip-Chr9 55286230 55287450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01899 82 374 GeBP Transcription Factor Family AT5G28040 35.097 1.41e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Aip09g01899 DUF573 1.4e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01899 - - ahf:112775206 696.812