Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01886 ATGCGCCATGGACATGCCCATGATCAGGAAGATTTATTGATTGAGATGGCAATGCTGAGGCATCAAAATCTGAGCCTTGAGATGGGGATTCAGCGCTACCTTGGAGAAGGCATAGCTTTTCTCCAATACGAAGAATTGACTAAGCTTGAAGGAGAACTTCAAAGCTCTGTTGCAAGGGTTCGAAAGCGTCAGGAAAAAGATTCTATGCTCATCGAATTTGTTTAG 225 0.4356 MRHGHAHDQEDLLIEMAMLRHQNLSLEMGIQRYLGEGIAFLQYEELTKLEGELQSSVARVRKRQEKDSMLIEFV 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01886 74 Pfam K-box region 5 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aip09g01886 74 ProSiteProfiles K-box domain profile. 9 74 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01886 Aip-Chr9 54178914 54179618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01886 5 64 MADS-box Gene Family AT5G23260 38.333 5.21e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01886 - K06596 ahf:112758495 134.42