Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01881 ATGGAGAGAGAGGACGAAGATGCGACGCAAGAGAGGAGGCTGTTCCGCCGTGCACCGTCGTCGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTCGGGCTCGCCGTGCTCTTGTCCGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCATGGCAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCTTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATCTTAA 357 0.5042 MEREDEDATQERRLFRRAPSSLLGSIEAAAAARARRALVRNNADRFLNWSTRFQIVLGMARGLQYLHEDSHLRIVHRDIKASNILLDHKFHPKIGDFGLARFFLEDQAYLSTQFAGTS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01881 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01881 118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Aip09g01881 118 Gene3D Transferase(Phosphotransferase) domain 1 34 118 - -
Aip09g01881 118 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 37 117 - -
Aip09g01881 118 Pfam Protein kinase domain 53 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01881 118 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 37 117 - -
Aip09g01881 118 SUPERFAMILY Protein kinase-like (PK-like) 44 117 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01881 Aip-Chr9 54025867 54026561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01881 47 117 Receptor kinase-like Gene Family AT1G70530 63.380 4.80e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g01881 Pkinase 1.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01881 - - ahf:112703114 174.481